LOCUS AY601636 2487 bp DNA linear VRL 12-APR-2006
DEFINITION Human adenovirus type 16 strain ch. 79, complete genome.
ACCESSION AY601636 REGION: 23611..26097
VERSION AY601636.1 GI:57116031
KEYWORDS .
SOURCE Human adenovirus 16
 ORGANISM Human adenovirus 16
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 2487)
 AUTHORS Lin,B., Wang,Z., Vora,G.J., Thornton,J.A., Schnur,J.M., Thach,D.C.,
 Blaney,K.M., Ligler,A.G., Malanoski,A.P., Santiago,J., Walter,E.A.,
 Agan,B.K., Metzgar,D., Seto,D., Daum,L.T., Kruzelock,R.,
 Rowley,R.K., Hanson,E.H., Tibbetts,C. and Stenger,D.A.
 TITLE Broad-spectrum respiratory tract pathogen identification using
 resequencing DNA microarrays
 JOURNAL Genome Res. 16 (4), 527-535 (2006)
 PUBMED 16481660
REFERENCE 2 (bases 1 to 2487)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE The complete nucleotide sequence and genome organization of Human
 Adenovirus Serotype 16
 JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2487)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE Direct Submission
 JOURNAL Submitted (16-APR-2004) Modernization Directorate (SGR), USAF
 Surgeon General Office HQ, 5201 Leesburg Pike, Suite 1401, Falls
 Church, VA 22041, USA
FEATURES  Location/Qualifiers
 source 1..2487
 /organism="Human adenovirus 16"
 /mol_type="genomic DNA"
 /strain="ch. 79"
 /serotype="16"
 /db_xref="taxon:31544"
 gene 1..>2487
 /gene="L4"
 CDS 1..2487
 /gene="L4"
 /codon_start=1
 /product="100 kDa hexon-assembly associated protein"
 /protein_id="AAW33447.1"
 /db_xref="GI:57116054"
  /translation="METQPSLPTSLQAPSHLAPSSDEEESLTTPPPSPATTTSTLDDE
 EEVDAAQEMQAQDNVKAEEIEADVEQDPGYVTPAEHEEELKRFLDREDDDRPEHQADG
 DHQEAGLGDHVADYLSGRGGEDVLLKHLARQSLIVKDALLNLTEVPISVEELSRAYEL
  NLFSPQIPPKRQPNGTCEANPRLNFYPAFTVPEVLATYHIFFKNQKIPVSCRANRTRA
 DALLNLGPGARLPDIASLEEVPKIFEGLGSDETRAANALQQGENGMDEHHSALVELEG
 DNARLAVLKRSIVVTHFAYPAVNLPPKVMSAVMDHLLIKRASPLSENQNMQDPDASDE
 GKPVVSDEQLSRWLGTNSPRDLEERRKLMMAVVLVTVELECLRRFFTDPETLRKLEEN
 LHYTFRHGFVRQACKISNVELTNLVSYMGILHENRLGQSVLHTTLKGEARRDYIRDCV
 YLYLCHTWQTGMGVWQQCLEEQNLKELDKLLQRSLKALWTGFDERTVASDLADIIFPE
 RLTVTLRNGLPDFMSQSMLNNFRSFILERSGILPATCCALPSDFVPLTYRECPPPLWS
 HCYLFRLANYLSYHSDVIEDVSGDGLLECHCRCNLCTPHRSLACNPQLLSETQIIGTF
 ELQGPNSEGEGSSPGQSLKLTPGLWTSAYLRKFHPEDYHPYEIRFYEDQSHPPKVELS
 ACVITQGAILAQLQAIQKSRQEFLLKKGSGVYLDPQTGEELNTRFPQDVPSPRKQEAE
 GAAVTPRGYGGRLGQSGRGGDGRLGQPGRGGGQPGGRQFGGGRRGGRGGGRSNRRQTV
 VIGGGDKQVPRQQHGYHLRSGSGGPAAAQQ"
 CDS 2189..>2487
 /gene="L4"
 /codon_start=1
  /product="33 kDa protein"
 /protein_id="AAW33449.1"
 /db_xref="GI:57116056"
 /translation="MSHRRGSKKLKVQLSPPEDMEEDWDSQAEEEMEDWDSQAEEVDS
 LEEDSLEEEDEEAEEVEEATAAKQLSSAAETSKSPDSSTATISAPGRGAQRRPNSRWD
 ETGRFPNPTTASKTAPTAVSKSRQPRQKKTAATTVTRKPAVRKSTTSAAGGGLRITAN
 EPAQTRELRNRIFPTLYAIFQQSRGQEQELKVKNRSLRSLTRSCLYHKSEDQLQRTLE
 DAEALFNKYCALTLKE"
 CDS 2189..>2487
 /gene="L4"
 /codon_start=1
 /product="22 kDa protein"
 /protein_id="AAW33448.1"
 /db_xref="GI:57116055"
 /translation="MSHRRGSKKLKVQLSPPEDMEEDWDSQAEEEMEDWDSQAEEVDS
 LEEDSLEEEDEEAEEVEEATAAKQLSSAAETSKSPDSSTATISAPGRGAQRRPNSRWD
 ETGRFPNPTTASKTGKKERQGYKSWRGHKNAIISCLHECGGNISFTRRYLLFHHGVNF
 PRNILHYYRHLHSPYCSQQVPATPTEKDSSDNGDQKTSS"
ORIGIN 
 1 atggaaactc agccatcact gccaacatcg ctgcaagcgc catcacacct cgcccccagc
  61 agcgacgagg aggagagctt aaccacccca ccacccagtc ccgctaccac cacctctacc
 121 ctcgatgatg aggaggaggt cgacgcagcc caggagatgc aggcgcagga taatgtgaaa
 181 gcggaagaga ttgaggcaga tgtcgagcag gacccgggct atgtgacacc ggcggagcac
 241 gaggaggagc tgaaacgttt tctagacaga gaggatgacg accgcccaga gcatcaagca
 301 gatggcgatc accaggaggc tggcctcggg gatcatgttg ccgactacct ctccgggcgt
 361 gggggggagg acgtgctcct caaacatcta gcaaggcagt cgctcatagt taaagacgca
 421 ctactcaacc tcaccgaagt gcccatcagt gtggaagagc ttagccgcgc ctacgagctg
 481 aacctctttt cgcctcagat accccccaag cggcagccaa acggcacctg cgaggccaac
 541 cctcgactca acttctatcc agcttttact gtccccgaag tgctggccac ctaccacatc
 601 ttttttaaga accaaaagat tccagtctcc tgccgcgcca accgcacccg cgcagatgcc
 661 cttctcaact tgggtccggg agctcgctta cctgatatag cttccttgga agaggttcca
 721 aagatctttg agggtctggg aagtgatgag actcgggccg caaatgctct gcaacaggga
 781 gagaatggca tggatgaaca tcacagcgct ctagtggaac tggagggtga caatgcccgg
 841 cttgcagtgc tcaagcgcag tatcgtggtc acccattttg cctaccccgc tgttaacctg
 901 ccgcccaaag tcatgagcgc tgtcatggac catctgctca tcaaacgagc aagtccactt
 961 tcagaaaacc agaacatgca ggatccagac gcctcggacg agggcaagcc ggtagtcagt
 1021 gacgagcagc tatctcgctg gctgggtacc aactcccccc gagatttgga agaaagacgc
 1081 aagcttatga tggctgtagt gctagtaact gttgagttgg agtgtctgcg ccgctttttt
 1141 accgaccccg agaccctgcg caagctagag gagaacctgc actacacctt cagacatggc
 1201 ttcgtgcggc aggcatgcaa gatctccaac gtggagctca ccaacctggt ttcatacatg
 1261 ggcattttgc atgagaaccg gctagggcag agcgttctgc acaccaccct gaagggggag
 1321 gcccgccgcg actacatccg agactgtgtc tacctctacc tctgccatac ctggcagact
 1381 ggtatgggtg tgtggcaaca gtgtttggaa gagcagaacc ttaaagagct ggacaagctc
 1441 ttgcagagat ccctcaaagc cctgtggaca ggttttgacg agcgcaccgt cgcctcggac
 1501 ttggcggaca tcatcttccc cgagcgtctt acggttactc tgcgaaacgg cctgccagac
 1561 ttcatgagcc agagcatgct taacaacttt cgctctttca tcctggaacg ctccggtatc
 1621 ctgcctgcca cctgctgtgc gctgccctcc gactttgtgc ctctcaccta ccgcgagtgc
 1681 ccaccgccgc tatggagcca ctgctaccta ttccgcctgg ccaactacct ctcctaccac
 1741 tcggatgtga tagaggatgt gagcggagac ggcctgctgg aatgccactg ccgatgcaat
 1801 ttatgcacac cccaccgctc cctcgcctgc aacccccagt tgctaagcga gacccagatc
 1861 atcggcacct tcgagttgca gggtcccaac agtgaaggcg aggggtcttc tccggggcag
 1921 agtctgaaac tgacaccggg gctgtggacc tccgcctacc tgcgcaagtt tcatcccgag
 1981 gactatcatc cctatgagat caggttctat gaggaccagt cacatcctcc caaagtcgag
 2041 ctctcagcct gcgtcatcac ccagggggca attctggccc aattgcaagc catccaaaaa
 2101 tcccgccaag aatttctgct gaaaaaggga agcggggtct accttgaccc ccagaccggt
 2161 gaggagctca acacaaggtt cccccaggat gtcccatcgc cgaggaagca agaagctgaa
 2221 ggtgcagctg tcacccccag aggatatgga ggaagactgg gacagtcagg cagaggagga
  2281 gatggaagat tgggacagcc aggcagagga ggtggacagc ctggaggaag acagtttgga
 2341 ggaggaagac gaggaggcag aggaggtgga agaagcaacc gccgccaaac agttgtcatc
 2401 ggcggcggag acaagcaagt ccccagacag cagcacggct accatctccg ctccgggtcg
 2461 gggggcccag cggcggccca acagtag
//