LOCUS AY601636 705 bp DNA linear VRL 12-APR-2006
DEFINITION Human adenovirus type 16 strain ch. 79, complete genome.
ACCESSION AY601636 REGION: join(25799..26147,26317..26672)
VERSION AY601636.1 GI:57116031
KEYWORDS .
SOURCE Human adenovirus 16
 ORGANISM Human adenovirus 16
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 705)
 AUTHORS Lin,B., Wang,Z., Vora,G.J., Thornton,J.A., Schnur,J.M., Thach,D.C.,
 Blaney,K.M., Ligler,A.G., Malanoski,A.P., Santiago,J., Walter,E.A.,
 Agan,B.K., Metzgar,D., Seto,D., Daum,L.T., Kruzelock,R.,
 Rowley,R.K., Hanson,E.H., Tibbetts,C. and Stenger,D.A.
 TITLE Broad-spectrum respiratory tract pathogen identification using
 resequencing DNA microarrays
 JOURNAL Genome Res. 16 (4), 527-535 (2006)
 PUBMED 16481660
REFERENCE 2 (bases 1 to 705)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE The complete nucleotide sequence and genome organization of Human
 Adenovirus Serotype 16
 JOURNAL Unpublished
REFERENCE 3 (bases 1 to 705)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE Direct Submission
 JOURNAL Submitted (16-APR-2004) Modernization Directorate (SGR), USAF
 Surgeon General Office HQ, 5201 Leesburg Pike, Suite 1401, Falls
 Church, VA 22041, USA
FEATURES Location/Qualifiers
 source 1..705
 /organism="Human adenovirus 16"
 /mol_type="genomic DNA"
 /strain="ch. 79"
 /serotype="16"
  /db_xref="taxon:31544"
 gene <1..>705
 /gene="L4"
 CDS <1..299
 /gene="L4"
 /codon_start=1
 /product="100 kDa hexon-assembly associated protein"
 /protein_id="AAW33447.1"
 /db_xref="GI:57116054"
  /translation="METQPSLPTSLQAPSHLAPSSDEEESLTTPPPSPATTTSTLDDE
 EEVDAAQEMQAQDNVKAEEIEADVEQDPGYVTPAEHEEELKRFLDREDDDRPEHQADG
 DHQEAGLGDHVADYLSGRGGEDVLLKHLARQSLIVKDALLNLTEVPISVEELSRAYEL
  NLFSPQIPPKRQPNGTCEANPRLNFYPAFTVPEVLATYHIFFKNQKIPVSCRANRTRA
 DALLNLGPGARLPDIASLEEVPKIFEGLGSDETRAANALQQGENGMDEHHSALVELEG
 DNARLAVLKRSIVVTHFAYPAVNLPPKVMSAVMDHLLIKRASPLSENQNMQDPDASDE
 GKPVVSDEQLSRWLGTNSPRDLEERRKLMMAVVLVTVELECLRRFFTDPETLRKLEEN
 LHYTFRHGFVRQACKISNVELTNLVSYMGILHENRLGQSVLHTTLKGEARRDYIRDCV
 YLYLCHTWQTGMGVWQQCLEEQNLKELDKLLQRSLKALWTGFDERTVASDLADIIFPE
 RLTVTLRNGLPDFMSQSMLNNFRSFILERSGILPATCCALPSDFVPLTYRECPPPLWS
 HCYLFRLANYLSYHSDVIEDVSGDGLLECHCRCNLCTPHRSLACNPQLLSETQIIGTF
 ELQGPNSEGEGSSPGQSLKLTPGLWTSAYLRKFHPEDYHPYEIRFYEDQSHPPKVELS
 ACVITQGAILAQLQAIQKSRQEFLLKKGSGVYLDPQTGEELNTRFPQDVPSPRKQEAE
 GAAVTPRGYGGRLGQSGRGGDGRLGQPGRGGGQPGGRQFGGGRRGGRGGGRSNRRQTV
 VIGGGDKQVPRQQHGYHLRSGSGGPAAAQQ"
 CDS 1..705
 /gene="L4"
  /codon_start=1
 /product="33 kDa protein"
 /protein_id="AAW33449.1"
 /db_xref="GI:57116056"
 /translation="MSHRRGSKKLKVQLSPPEDMEEDWDSQAEEEMEDWDSQAEEVDS
 LEEDSLEEEDEEAEEVEEATAAKQLSSAAETSKSPDSSTATISAPGRGAQRRPNSRWD
 ETGRFPNPTTASKTAPTAVSKSRQPRQKKTAATTVTRKPAVRKSTTSAAGGGLRITAN
 EPAQTRELRNRIFPTLYAIFQQSRGQEQELKVKNRSLRSLTRSCLYHKSEDQLQRTLE
 DAEALFNKYCALTLKE"
 CDS 1..431
 /gene="L4"
 /codon_start=1
 /product="22 kDa protein"
 /protein_id="AAW33448.1"
 /db_xref="GI:57116055"
 /translation="MSHRRGSKKLKVQLSPPEDMEEDWDSQAEEEMEDWDSQAEEVDS
 LEEDSLEEEDEEAEEVEEATAAKQLSSAAETSKSPDSSTATISAPGRGAQRRPNSRWD
 ETGRFPNPTTASKTGKKERQGYKSWRGHKNAIISCLHECGGNISFTRRYLLFHHGVNF
 PRNILHYYRHLHSPYCSQQVPATPTEKDSSDNGDQKTSS"
ORIGIN 
 1 atgtcccatc gccgaggaag caagaagctg aaggtgcagc tgtcaccccc agaggatatg
 61 gaggaagact gggacagtca ggcagaggag gagatggaag attgggacag ccaggcagag
 121 gaggtggaca gcctggagga agacagtttg gaggaggaag acgaggaggc agaggaggtg
 181 gaagaagcaa ccgccgccaa acagttgtca tcggcggcgg agacaagcaa gtccccagac
 241 agcagcacgg ctaccatctc cgctccgggt cggggggccc agcggcggcc caacagtaga
 301 tgggacgaga ccgggcgatt cccaaacccg accaccgctt ccaagaccgc ccctactgca
 361 gtcagcaagt cccggcaacc ccgacagaaa aagacagcag cgacaacggt gaccagaaaa
 421 ccagcagtta gaaaatccac aacaagtgca gcaggaggag gactgaggat cacagcgaac
 481 gagccagcgc agaccagaga gctgaggaac cggatctttc caaccctcta tgccatcttc
 541 cagcagagtc gggggcaaga gcaggaatta aaagtaaaaa accgatctct gcgctcgctc
 601 accagaagtt gtttgtatca caagagcgaa gaccaacttc agcgcactct cgaggacgcc
 661 gaggctctct tcaacaagta ctgcgcgctg actcttaaag agtag
//