LOCUS       AY601636                 321 bp    DNA     linear   VRL 12-APR-2006
DEFINITION  Human adenovirus type 16 strain ch. 79, complete genome.
ACCESSION   AY601636 REGION: 27425..27745
VERSION     AY601636.1  GI:57116031
KEYWORDS    .
SOURCE      Human adenovirus 16
  ORGANISM  Human adenovirus 16
            Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE   1  (bases 1 to 321)
  AUTHORS   Lin,B., Wang,Z., Vora,G.J., Thornton,J.A., Schnur,J.M., Thach,D.C.,
            Blaney,K.M., Ligler,A.G., Malanoski,A.P., Santiago,J., Walter,E.A.,
            Agan,B.K., Metzgar,D., Seto,D., Daum,L.T., Kruzelock,R.,
            Rowley,R.K., Hanson,E.H., Tibbetts,C. and Stenger,D.A.
  TITLE     Broad-spectrum respiratory tract pathogen identification using
            resequencing DNA microarrays
  JOURNAL   Genome Res. 16 (4), 527-535 (2006)
   PUBMED   16481660
REFERENCE   2  (bases 1 to 321)
  AUTHORS   Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
            Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
  CONSRTM   Epidemic Outbreak Surveillance (EOS)
  TITLE     The complete nucleotide sequence and genome organization of Human
            Adenovirus Serotype 16
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 321)
  AUTHORS   Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
            Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
  CONSRTM   Epidemic Outbreak Surveillance (EOS)
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2004) Modernization Directorate (SGR), USAF
            Surgeon General Office HQ, 5201 Leesburg Pike, Suite 1401, Falls
            Church, VA 22041, USA
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Human adenovirus 16"
                     /mol_type="genomic DNA"
                     /strain="ch. 79"
                     /serotype="16"
                     /db_xref="taxon:31544"
     gene            <1..315
                     /gene="L4"
     CDS             <1
                     /gene="L4"
                     /codon_start=1
                     /product="protein VIII"
                     /protein_id="AAW33450.1"
                     /db_xref="GI:57116057"
                     /translation="MSKEIPTPYMWSYQPQMGLAAGASQDYSTRMNWLSAGPSMISRV
                     NDIRAYRNQLLLEQSALTTTPRQHLNPRNWPAALVYQENPAPTTVLLPRDAQAEVQMT
                     NAGVQLAGGSALCRHRPQQSIKRLVIRGRGIQLNDESVSSSLGLRPDGVFQIAGCGRS
                     SFTPRQAVLTLESSSSQPRSGGIGTLQFVEEFTPSVYFNPFSGSPGQYPDEFIPNFDA
                     ISESVDGYD"
     gene            <1..>321
                     /gene="E3"
     CDS             1..321
                     /gene="E3"
                     /codon_start=1
                     /product="12.2 kDa glycoprotein"
                     /protein_id="AAW33451.1"
                     /db_xref="GI:57116058"
                     /translation="MSNGGAAELARLRHLDHCRRFRCFARELTEFIYFELSEEHPQGP
                     AHGVRITIEGGIDSRLHRIFSQRPVLIERDQGNTTISIYCICNHPGLHESLCCLVCAE
                     FNKN"
     CDS             275..>321
                     /gene="E3"
                     /codon_start=1
                     /product="16.1 kDa membrane protein"
                     /protein_id="AAW33452.1"
                     /db_xref="GI:57116059"
                     /translation="MKAFAVLFVLSLIKTELRPSYGLPLLQSGLYNTNQIFQKTQTLP
                     PLIQDSNSTLPAPSTTNLPETNKLGSHLQHRLSRSLLSANTTTPKTGGELRGLPTDDP
                     WVVAGFVTLGVVAGGLVLILCYLYTPCCAYLVILCCWFKKWGPY"
     polyA_signal    310..315
                     /gene="L4"
ORIGIN      
        1 atgtctaatg gtggcgcggc tgagctagct cgactgcgac acctagacca ctgccgccgc
       61 tttcgctgtt tcgcccggga actcaccgag ttcatctact tcgaactctc cgaggagcac
      121 cctcagggtc cggcccacgg agtgcggatt accatcgaag ggggaataga ctctcgcctg
      181 catcgcatct tctcccagcg gcccgtgctg attgagcgcg accagggaaa tacaaccatc
      241 tccatctact gcatttgtaa ccaccccgga ttgcatgaaa gcctttgctg tcttgtttgt
      301 gctgagttta ataaaaactg a
//