LOCUS AY601636 2823 bp DNA linear VRL 12-APR-2006
DEFINITION Human adenovirus type 16 strain ch. 79, complete genome.
ACCESSION AY601636 REGION: 18450..21272
VERSION AY601636.1 GI:57116031
KEYWORDS .
SOURCE Human adenovirus 16
 ORGANISM Human adenovirus 16
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 2823)
 AUTHORS Lin,B., Wang,Z., Vora,G.J., Thornton,J.A., Schnur,J.M., Thach,D.C.,
 Blaney,K.M., Ligler,A.G., Malanoski,A.P., Santiago,J., Walter,E.A.,
 Agan,B.K., Metzgar,D., Seto,D., Daum,L.T., Kruzelock,R.,
 Rowley,R.K., Hanson,E.H., Tibbetts,C. and Stenger,D.A.
 TITLE Broad-spectrum respiratory tract pathogen identification using
 resequencing DNA microarrays
 JOURNAL Genome Res. 16 (4), 527-535 (2006)
 PUBMED 16481660
REFERENCE 2 (bases 1 to 2823)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE The complete nucleotide sequence and genome organization of Human
 Adenovirus Serotype 16
 JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2823)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE Direct Submission
 JOURNAL Submitted (16-APR-2004) Modernization Directorate (SGR), USAF
 Surgeon General Office HQ, 5201 Leesburg Pike, Suite 1401, Falls
 Church, VA 22041, USA
FEATURES Location/Qualifiers
 source 1..2823
 /organism="Human adenovirus 16"
 /mol_type="genomic DNA"
 /strain="ch. 79"
 /serotype="16"
 /db_xref="taxon:31544"
 gene <1..>2823
 /gene="L3"
 CDS 1..2823
 /gene="L3"
 /codon_start=1
 /product="hexon protein"
 /protein_id="AAW33444.1"
 /db_xref="GI:57116051"
 /translation="MATPSMMPQWAYMHIAGQDASEYLSPGLVQFARATDTYFSMGNK
 FRNPTVAPTHDVTTDRSQRLMLRFVPVDREDNTYSYKVRYTLAVGDNRVLDMASTFFD
 IRGVLDRGPSFKPYSGTAYNSLAPKGAPNTCQWKDSDSKMHTFGVAAMPGVTGKKIEA
 DGLPIGIDSTSGTDTVIYADKTFQPEPQVGNASWVDANGTEEKYGGRALKDTTKMKPC
 YGSFAKPTNKEGGQANLKDSETAATTPNYDIDLAFFDNKNIAANYDPDIVMYTENVDL
 QTPDTHIVYKPGTEDTSSESNLGQQAMPNRPNYIGFRDNFIGLMYYNSTGNMGVLAGQ
 ASQLNAVVDLQDRNTELSYQLLLDSLGDRTRYFSMWNQAVDSYDPDVRIIENHGVEDE
 LPNYCFPLNGVGFTDTYQGVKVKTDAVAGTSGTQWDKDDTTVSTANEIHGGNPFAMEI
 NIQANLWRSFLYSNVALYLPDSYKYTPSNVTLPENKNTYDYMNGRVVPPSLVDTYVNI
 GARWSLDAMDNVNPFNHHRNAGLRYRSMLLGNGRYVPFHIQVPQKFFAVKNLLLLPGS
 YTYEWNFRKDVNMVLQSSLGNDLRVDGASISFTSINLYATFFPMAHNTASTLEAMLRN
 DTNDQSFNDYLSAANMLYPIPANATNIPISIPSRNWAAFRGWSFTRLKTKETPSLGSG
 FDPYFVYSGSIPYLDGTFYLNHTFKKVSIMFDSSVSWPGNDRLLSPNEFEIKRTVDGE
 GYNVAQCNMTKDWFLVQMLANYNIGYQGFYIPEGYKDRMYSFFRNFQPMSRQVVDEVN
 YTDYKAVTLPYQHNNSGFVGYLAPTMRQGEPYPANYPYPLIGTTAVKSVTQKKFLCDR
 TMWRIPFSSNFMSMGALTDLGQNLLYANSAHALDMTFEVDPMDEPTLLYLLFEVFDVV
  RVHQPHRGVIEAVYLRTPFSAGNATT"
ORIGIN 
 1 atggccaccc catcgatgat gccccaatgg gcatacatgc acatcgccgg acaggatgct
 61 tcggagtacc tgagtccggg tctggtgcag ttcgcccgtg caacagacac ctacttcagt
 121 atggggaaca agtttagaaa ccccacagtg gcgcccaccc acgatgtgac caccgaccgt
 181 agccagcgac taatgctgcg cttcgtgccc gttgaccggg aagacaatac ctactcttac
 241 aaagttcgct acacgctggc tgtaggggac aacagagtac tggatatggc cagcacgttc
 301 tttgacatcc gcggcgtgct ggaccggggc cctagcttca aaccctactc cgggaccgcc
 361 tacaacagcc tggctcccaa gggagcgccc aacacctgcc agtggaagga ttctgacagc
 421 aaaatgcata cctttggggt agctgccatg cccggtgtta ctgggaaaaa gatagaagct
 481 gatgggctgc ctattggaat agattcaact tctggaactg acacagtaat ttatgctgat
 541 aaaactttcc aaccagaacc acaagttgga aatgccagtt gggttgacgc caatggtaca
 601 gaggaaaaat atggaggcag agctctgaag gacactacaa agatgaaacc ctgctatggt
 661 tctttcgcca agcctaccaa caaagaaggt ggtcaggcta acttaaaaga ttcagaaacc
 721 gccgccacca ctcctaacta tgatatagat ctggctttct ttgacaacaa aaatattgct
 781 gctaactacg atccagatat tgtaatgtac acagaaaatg ttgacttgca gactccagat
 841 actcatattg tatacaaacc tggaacagag gacaccagct ctgaatccaa tttgggtcag
 901 caagccatgc ctaacagacc caactacatt ggcttcagag acaattttat tgggctcatg
 961 tactacaaca gcactggcaa tatgggggtg ctggccggtc aggcctctca gctgaatgct
 1021 gtggttgact tgcaagacag aaacactgaa ctgtcctacc agctcttgct tgactctctg
 1081 ggtgacagaa cccggtattt cagtatgtgg aatcaggcgg tggacagcta tgatcctgat
 1141 gtgcgtatta ttgaaaacca tggtgtggag gacgaattgc caaactattg ctttccgttg
 1201 aatggtgtgg gatttacaga cacttaccaa ggtgttaaag ttaaaacaga tgcagttgct
 1261 ggaaccagtg gaacacagtg ggacaaagat gacaccacag ttagtactgc taatgaaatc
 1321 catggaggca atccttttgc catggaaatc aacatccaag ccaatctatg gcgaagtttc
 1381 ctttattcca atgtggcttt gtatctccca gactcgtata aatacacccc gtccaatgtc
 1441 actctcccag aaaacaaaaa cacctacgac tacatgaacg ggcgggtggt gccgccatct
 1501 ctagtagaca cctatgtgaa cattggtgcc aggtggtctc tggatgccat ggacaatgtc
 1561 aacccattca accaccaccg taacgctggc ttgcgttacc gatccatgct tctgggtaac
 1621 ggacgttatg tgcctttcca catacaagtg cctcaaaaat tcttcgctgt taaaaacctg
 1681 ctgcttctcc caggctccta cacttatgag tggaacttta ggaaggatgt aaacatggtt
 1741 ctacagagtt cccttggtaa cgacctacgg gtagatggcg ccagcatcag tttcacgagc
 1801 atcaatcttt atgctacttt tttccccatg gctcacaaca ccgcttccac ccttgaagcc
 1861 atgctgcgga atgacaccaa tgatcagtca ttcaacgact acctatctgc agctaacatg
 1921 ctctacccca tacctgccaa cgcaaccaat attcccattt ccattccttc tcgcaactgg
 1981 gcggctttca gaggctggtc atttaccaga ctgaaaacca aagaaactcc ctctttgggg
 2041 tctggatttg acccatactt tgtctattcc ggttctattc cctacctgga tggtaccttc
 2101 tatctaaatc acacttttaa gaaggtttcc atcatgtttg actcttcagt gagctggcct
 2161 ggaaatgaca ggttactatc tcctaacgaa tttgaaataa agcgcactgt ggatggcgaa
 2221 ggctacaacg tagcccaatg caacatgacc aaagactggt tcttggtaca gatgctcgcc
 2281 aactacaaca ttggctacca gggcttttac atccctgagg gatacaagga tcgcatgtac
 2341 tcctttttca gaaacttcca gcctatgagc aggcaggtgg ttgatgaggt taattacact
 2401 gactacaaag ccgtcacctt accatatcaa cacaacaact ctggctttgt aggatacctt
 2461 gcgcctacta tgagacaagg ggaaccttac ccagccaatt atccataccc gctcatcgga
 2521 actactgccg ttaagagtgt tacccaaaaa aagttcctgt gcgacaggac catgtggcgc
  2581 ataccgttct ccagcaactt catgtccatg ggggccctta cagacctggg acaaaacctg
 2641 ctctatgcca actcggccca tgcactggac atgacttttg aggtggatcc catggatgag
 2701 cccaccctgc tttatcttct tttcgaagtc ttcgacgtgg tcagagtgca ccagccacac
 2761 cgcggcgtca tcgaggccgt ctacctgcgc acaccgttct cggccggcaa cgccaccaca
 2821 taa
//