LOCUS AY601636 684 bp DNA linear VRL 12-APR-2006
DEFINITION Human adenovirus type 16 strain ch. 79, complete genome.
ACCESSION AY601636 REGION: 26742..27425
VERSION AY601636.1 GI:57116031
KEYWORDS .
SOURCE Human adenovirus 16
 ORGANISM Human adenovirus 16
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 684)
 AUTHORS Lin,B., Wang,Z., Vora,G.J., Thornton,J.A., Schnur,J.M., Thach,D.C.,
 Blaney,K.M., Ligler,A.G., Malanoski,A.P., Santiago,J., Walter,E.A.,
 Agan,B.K., Metzgar,D., Seto,D., Daum,L.T., Kruzelock,R.,
 Rowley,R.K., Hanson,E.H., Tibbetts,C. and Stenger,D.A.
 TITLE Broad-spectrum respiratory tract pathogen identification using
 resequencing DNA microarrays
 JOURNAL Genome Res. 16 (4), 527-535 (2006)
 PUBMED 16481660
REFERENCE 2 (bases 1 to 684)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE The complete nucleotide sequence and genome organization of Human
 Adenovirus Serotype 16
 JOURNAL Unpublished
REFERENCE 3 (bases 1 to 684)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE  Direct Submission
 JOURNAL Submitted (16-APR-2004) Modernization Directorate (SGR), USAF
 Surgeon General Office HQ, 5201 Leesburg Pike, Suite 1401, Falls
 Church, VA 22041, USA
FEATURES Location/Qualifiers
 source 1..684
 /organism="Human adenovirus 16"
 /mol_type="genomic DNA"
 /strain="ch. 79"
 /serotype="16"
 /db_xref="taxon:31544"
 gene <1..>684
 /gene="L4"
 CDS 1..684
 /gene="L4"
 /codon_start=1
 /product="protein VIII"
 /protein_id="AAW33450.1"
 /db_xref="GI:57116057"
 /translation="MSKEIPTPYMWSYQPQMGLAAGASQDYSTRMNWLSAGPSMISRV
 NDIRAYRNQLLLEQSALTTTPRQHLNPRNWPAALVYQENPAPTTVLLPRDAQAEVQMT
 NAGVQLAGGSALCRHRPQQSIKRLVIRGRGIQLNDESVSSSLGLRPDGVFQIAGCGRS
 SFTPRQAVLTLESSSSQPRSGGIGTLQFVEEFTPSVYFNPFSGSPGQYPDEFIPNFDA
 ISESVDGYD"
 gene 366..>684
 /gene="E3"
 TATA_signal 366..371
 /gene="E3"
 CDS 684..>684
 /gene="E3"
 /codon_start=1
 /product="12.2 kDa glycoprotein"
 /protein_id="AAW33451.1"
 /db_xref="GI:57116058"
 /translation="MSNGGAAELARLRHLDHCRRFRCFARELTEFIYFELSEEHPQGP
 AHGVRITIEGGIDSRLHRIFSQRPVLIERDQGNTTISIYCICNHPGLHESLCCLVCAE
 FNKN"
ORIGIN 
 1 atgagtaaag agattcccac gccttacatg tggagctatc agccccaaat ggggttggca
 61 gcaggtgctt cccaggacta ctccacccgc atgaattggc ttagcgccgg gccctcaatg
 121 atatcacggg ttaatgatat acgagcttat cgaaaccagt tactcctaga acagtcagct
 181 ctcaccacca caccccgcca acaccttaat ccccgaaatt ggcccgccgc cctggtgtac
 241 caggaaaatc ccgctcccac caccgtacta cttcctcgag acgcccaggc cgaagttcag
 301 atgactaacg caggtgtaca gctggcgggc ggttccgccc tatgtcgtca ccgacctcaa
 361 cagagtataa aacgcctggt gatcagaggc cgaggtatcc agctcaacga cgagtcggtt
 421 agctcttcgc ttggtctgcg accagacgga gtcttccaga tcgccggctg tgggagatct
 481 tccttcactc ctcgtcaggc tgtgctgact ttggagagtt cgtcctcgca gccccgctcg
 541 ggcggcatcg gaactctcca gtttgtggag gagtttactc cctctgtcta cttcaacccc
 601 ttctccggct ctcctggcca gtacccggac gagttcatac cgaacttcga cgcaatcagc
 661 gagtcagtgg atggctatga ttga
//