LOCUS AY601633 3582 bp DNA linear VRL 10-MAY-2006
DEFINITION Human adenovirus type 21 strain AV-1645, complete genome.
ACCESSION AY601633 REGION: complement(join(5049..8621,13828..13836))
VERSION AY601633.1 GI:57115934
KEYWORDS .
SOURCE Human adenovirus 21
 ORGANISM Human adenovirus 21
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 3582)
 AUTHORS Lin,B., Wang,Z., Vora,G.J., Thornton,J.A., Schnur,J.M., Thach,D.C.,
 Blaney,K.M., Ligler,A.G., Malanoski,A.P., Santiago,J., Walter,E.A.,
 Agan,B.K., Metzgar,D., Seto,D., Daum,L.T., Kruzelock,R.,
 Rowley,R.K., Hanson,E.H., Tibbetts,C. and Stenger,D.A.
 TITLE Broad-spectrum respiratory tract pathogen identification using
 resequencing DNA microarrays
 JOURNAL Genome Res. 16 (4), 527-535 (2006)
 PUBMED 16481660
REFERENCE 2 (bases 1 to 3582)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE The complete nucleotide sequence and genome organization of Human
 Adenovirus Serotype 21
 JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3582)
 AUTHORS Tibbetts,C., Purkayastha,A., Su,J., Carlisle,S., Ospina,R.,
 Reynolds,T., Rowley,R., Hanson,E. and Seto,D.
 CONSRTM Epidemic Outbreak Surveillance (EOS)
 TITLE Direct Submission
 JOURNAL Submitted (16-APR-2004) Modernization Directorate (SGR), USAF
 Surgeon General Office HQ, 5201 Leesburg Pike, Suite 1401, Falls
 Church, VA 22041, USA
FEATURES  Location/Qualifiers
 source 1..3582
 /organism="Human adenovirus 21"
 /mol_type="genomic DNA"
 /strain="AV-1645"
 /serotype="21"
 /db_xref="taxon:32608"
 gene <9..>10
 /gene="E2B"
 CDS 1..3582
 /gene="E2B"
 /codon_start=1
 /product="DNA polymerase"
 /protein_id="AAW33337.2"
 /db_xref="GI:95021543"
 /translation="MALVQAHGAGSFHPEASDPGCQPPRRRACESSQSTVPEPTRARR
 RRTTASHAAGSRTAPAARCAPSTPLLNMQEATEPPPPKRKNKGTVVAPKGHGTLQAID
 ISTNGPVEIKYHLNLPHALEKIMQVNLLTLPTNLTPQRLRTLDSSGLRALVLELRPCR
 AEVWTCLPRGLVSMTTIETEDGHADADNIVEREVQTPGLNFPLKFLVKGSQVQLIHEV
 HPVNRCEYCGRLYKHKHECSARRREFYFHHINSHSSNWWQEIQFFPIGSHPRTERLFL
 TYDVETYTWMGSFGKQLIPFMLVMKLSGDQRLVNIAYDLAMKLKWDRWRQDPQTFYCV
 TPEKMAVGQHFRQYRDQLQTALAVDLWSSFLKANPHVHEWALEHYALTDPTDLTFEEL
 KKLPHVRGTPRFLELYIVGHNINGFDEIVLAAQVINNRAEVPQPFKITRNFMPRAGKI
 LFNDVTFALPNPAYKKRVDFQLWEQGACDDIDFKYQFLKVMVRDTFALTHTSLRNAAQ
 AYSLPVEKGCCPYKAVNQFYMLGSYRAEKDGFPLEEYWKDREEYLLNRELWEKKSQPR
 YDIIQETLDYCALDVLVTAELVAKLQESYAHFIRDSVGLPHAHFNIFQRPTISSNSHA
 IFRQIVYRAEKPNRTNLGPGLLAPSHELYDYVRASIRGGRCYPTYIGILEEPLYVYDI
 CGMYASALTHPMPWGTPLNPYERALAVREWQMTLDDPATISYFDKDLLPGIFTIDADP
  PDEFMLDPLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWRVRIVPDELTTIF
 PEWKCVAREYVQLNIAAKERADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQ
 MDESLMKGVSAGTVNIKSSSFLETDNLSAEVMPAFEREYLPQQLALLDSDPEDSEDEQ
 RPAPFYTPPAGTPGHVAYTYKPITFLDVEEGDMCLHTVEKVDPLVDNDRYPSHVASFV
 LAWTRAFVSEWAGFLYEEDRGTPLEDRPIKSVYGDTDSLFVTQRGHELMETKGKKRIK
 KHGGKLVFDPDEPDLTWLVECETVCASCGADAYSPESIFLAPKLYALKCIYCPACHKT
 SKGKLRAKGHAAEALNYELMVNCYLADLQGADRQRFSTSRMSLKRTLASAQPGAHPFT
 VTETTLTRTLRPWKDRTLAALDAHRLIPYSRSRPNPRNEEVCWIEMP"
 CDS 1..>211
 /gene="E2B"
 /codon_start=1
 /product="terminal protein precursor"
 /protein_id="AAW33343.1"
 /db_xref="GI:57115948"
 /translation="MALSINDCARLTGQTVPTMNYFMPLRNIWNRVREFPRASTTASG
 ITWMSRYIYGYHRLMLEDLAPGAPATERWPLYRQPPPHFLIGYQYLVRTCNDYIFDTR
 AYSRLKYTEIVRPGHQTVNWSVMANCSYTINTGAYHRFVDFDDFQATLTQVQQAILAE
 RVVADLALVQPMRGFGITRMHGRAGEEEVPVERLMQDYYKDLARCQDNAWGMAHRLRI
 QQAGPKDLVLLATIRRLKTAYFNFITSSIVSPSKEEEGEERENPDRASSRPRPQETVL
 SLPCDCDWLDAFVERFSDPVDLETIRSLRGVPTGQLIKCIISAVSLPNGEPPSHHFRE
 MRGGVFTLRPRENGRAVTETMRRRRGEVIERFIDRLPVRRRRRRVPPPPAAPPEEEEM
 LVEEEEIEEEIPGAFEREVRTTVAELIRLLEEELTVSARNSQFFNFAVDFYEAMERLE
 ALGDVSEMPLRRWIMYFFVTEHIATTLNYLFQRLCNYAVFTRHVELNLAQVVMRARDP
 VGAVVYSRVWNEAGMNAFSQLIGRISNDLAATVERAGRGDLQEEEIEQFMAEIAYQDN
  SGDVQEILRQAAVNDTEIDSVELSFRFKLTGPVAFTQRRQIQDVNRRVVAHASLLRAQ
 YQNLPARGADVPLPAMPPGPEPPLPPGARPRHRF"
 CDS complement(403..804)
 /codon_start=1
 /product="DNA binding protein"
  /protein_id="AAW33341.1"
 /db_xref="GI:57115946"
 /translation="MRANREELDLLPPVGGMAVDVMEVELPATRRAFMLVLVQTAAVL
  AAIHGMHLMNELYLTSFDEKFQWKIEAWRLYLALYYVVCIGMTIFCLDGGHADEPSRE
 ASPDLGAAGAELEDESAQAGAVQGPETLRSQVLRART"
 CDS complement(10..>85)
 /inference="non-experimental evidence, no additional
  details recorded"
 /codon_start=1
 /product="hypothetical 14.5 kDa protein"
 /protein_id="AAW33344.1"
  /db_xref="GI:57115949"
 /translation="MRDDAAVDILDLTPLGESYRPRELEPEREFNRINLGIVDGGLPK
 DFLHVARVVLVGDLGHELLDLFLLKISAARSLDGGRQVVGDAPNELRECIHARLVPDA
 AVDHSPHGISRAHDHLGEVELHVAGEDRIVA"
 CDS 60..404
 /inference="non-experimental evidence, no additional
 details recorded"
 /codon_start=1
 /product="hypothetical 12.6 kDa protein"
  /protein_id="AAW33342.1"
 /db_xref="GI:57115947"
 /translation="MSTAASSRMRVFSEHSTRTYPRAAPTYHCQPCRRVPNRPCRPVR
 ALDTASKHARSNRATAAQKEKQGHGGSTQGARNPASHRHLHQRTRGDQVPSEPPSRPR
 KDHASQSPDTAY"
 CDS complement(1213..1500)
 /inference="non-experimental evidence, no additional
 details recorded"
  /codon_start=1
 /product="hypothetical 10.4 kDa protein"
 /protein_id="AAW33340.1"
 /db_xref="GI:57115945"
 /translation="MSEGKSVPDHDFEELILEVNVITGPLFPELEVHPLLVGGVGQSE
 SNIIEEDLAGPGHEISGDFERLRDLCSVIDNLSGQDDLIKAIDVVPHYVQF"
 CDS 1244..1765
 /inference="non-experimental evidence, no additional
 details recorded"
 /codon_start=1
 /product="hypothetical 19 kDa protein"
 /protein_id="AAW33339.1"
 /db_xref="GI:57115944"
 /translation="MALMRSSWPLRLSITEQRSLSLSKSPEISCPGPARSSSMMLLSL
 CPTPPTRSGWTSNSGNRGPVMTLTSSINSSKSWSGTLLPSLIPRCAMQPKHTLFQWRR
 DAVPTRQSISSTCWALTVQKKTGFPSKSTGRIAKNTFSTASCGKRKANRVMTSSRKLS
 TTVPWMYSSPPSW"
 CDS complement(2169..2489)
 /inference="non-experimental evidence, no additional
 details recorded"
 /codon_start=1
 /product="hypothetical 11.5 kDa protein"
 /protein_id="AAW33338.1"
 /db_xref="GI:57115943"
 /translation="MERMVWFFSLSARSLAAMLSWTYSRATHFHSGKMVVSSSGTILT
 RHPLLCRVIRSTLVATSPRRGSLVQQSRPPFLEQKGGRGSSMNSSGGSASMVNIPGSK
 SLSK"
 gene <3061..3582
 /gene="IVa2"
 CDS join(3061..3073,3352..3582)
 /gene="IVa2"
 /codon_start=1
 /product="maturation protein IVa2"
  /protein_id="AAW33336.1"
 /db_xref="GI:57115941"
 /translation="METKGRRSAAVLDQQDESEAHPRKRPTRRAPLHRDGNNPDSDAA
  TMEGSDPSSAGRPSSDSLLQEPSQPAKRGGLLDRDAIEHITELWDRLELLQQTLSKMP
 MADGLKPLKNFSSLQELLSLGGERLLTDLVRENIHVREMMNEVAPLLREDGSCRSLNY
 HLQPVIGVIYGPTGCGKSQLLRNLLSSQLITPAPETVFFIAPQVDMIPPSELKAWEMQ
 ICEGNYAPGPEGTFIPQSGTLRPKFIKMAYDDLTQEHNYDVSDPRNVFARAAAHGPIA
 IIMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIAN
 LKIQSKMHIISPRMHPSQLNRFVNTYTKGLPVAISLLLKDIVQHHALRPCYDWVIYNT
 TPEQEALQWSYLHPRDGLMPMYLNIQSHLYRVLEKIHRVLNDRDRWSRAYRARKIK"
ORIGIN 
 1 atggccttgg ttcaagctca cggggccggt agctttcacc cagaggcgtc agatccagga
 61 tgtcaaccgc cgcgtcgtcg cgcatgcgag tcttctcaga gcacagtacc agaacctacc
 121 cgcgcgcggc gccgacgtac cactgccagc catgccgccg ggtcccgaac cgcccctgcc
 181 gcccggtgcg cgccctcgac accgcttcta aacatgcaag aagcaacaga gccaccgccg
 241 cccaaaagga aaaacaaggg cacggtggta gcacccaagg ggcacggaac cctgcaagcc
 301 atcgacatct ccaccaacgg acccgtggag atcaagtacc atctgaacct ccctcacgcc
  361 ctcgaaaaga tcatgcaagt caatctcctg acactgccta ctaacctgac tccgcagcgt
 421 ctcaggaccc tggacagctc cggcctgcgc gctctcgtcc tcgagctccg cccctgccgc
 481 gccgaggtct ggacttgcct cccgcgaggg ctcgtcagca tgaccaccat cgagacagaa
 541 gatggtcatg ccgatgcaga caacatagta gagcgcgagg tacaaacgcc aggcctcaat
 601 tttccactga aatttctcgt caaaggaagt caggtacaac tcattcatga ggtgcatccc
 661 gtgaatcgct gcgagtactg cggccgtctg tacaagcaca agcatgaatg ctcggcgcgt
 721 cgcagggagt tctacttcca tcacatcaac agccattcct ccaactggtg gcaggagatc
 781 cagttcttcc cgattggctc tcatcctcgc acagaaaggc tcttcctcac ctacgatgtg
 841 gaaacctaca cctggatggg gtcctttggc aagcagctaa tccccttcat gctggtcatg
 901 aaactctctg gagaccagcg gctcgtcaac atcgcctatg acctcgccat gaaactcaag
 961 tgggatcgct ggcggcagga cccccaaacc ttctattgcg tcaccccaga aaagatggca
 1021 gtcgggcagc attttcgtca gtaccgggac cagttacaaa cagcactggc agtggacctc
 1081 tggtcctcct tcctcaaagc gaaccctcac gtgcacgaat gggccctcga acactatgct
 1141 ctcactgacc ctacagatct cacttttgaa gaactcaaga agctgcctca tgtcaggggc
 1201 acccctcgat tcttagaact gtacatagtg gggcacaaca tcaatggctt tgatgagatc
 1261 gtcttggccg ctcaggttat caataaccga gcagaggtcc ctcagccttt caaaatcacc
 1321 cgaaatttca tgcccagggc cggcaagatc ctcttcaatg atgttacttt cgctttgccc
 1381 aaccccgcct acaagaagcg ggtggacttc caactctggg aacagggggc ctgtgatgac
 1441 attgacttca agtatcaatt cctcaaagtc atggtcaggg acacttttgc cctcactcat
 1501 acctcgctgc gcaatgcagc ccaagcatac tctcttccag tggagaaggg atgctgtccc
 1561 tacaaggcag tcaatcagtt ctacatgttg ggctcttacc gtgcagaaaa agacgggttt
 1621 cccctcgaag agtactggaa ggatcgcgaa gaataccttc tcaaccgcga gctgtgggaa
 1681 aagaaaagcc aaccgcgtta tgacatcatc caggaaactc tcgactactg tgccctggat
 1741 gtactcgtca ccgccgagct ggtagccaag ctgcaagagt catatgccca cttcataagg
 1801 gactctgtag gcctacctca tgcccatttt aacatattcc agagacctac tatctcttcc
 1861 aattcccatg ccatctttcg ccagatcgtt tacagggcgg aaaaacccaa ccgcaccaat
 1921 ctgggcccgg gtcttctcgc cccctcacat gaactctatg actatgtgcg agcaagcatc
 1981 agaggggggc gctgttatcc cacttacatc ggcatcctcg aagagcccct ctatgtctac
 2041 gatatctgtg gcatgtatgc ctccgcgctc acccacccca tgccctgggg cacccctctt
 2101 aacccctatg agcgcgcgct ggcagttcga gaatggcaga tgaccttgga tgatcccgcc
 2161 accatcagct attttgacaa agatttgcta ccgggaatat ttaccataga tgcggacccc
 2221 cctgatgagt tcatgctaga ccccctccca cctttctgtt caagaaaagg aggtcgactc
 2281 tgctggacca atgagcccct ccgaggcgag gtggccacca gtgtggatct gataaccctg
 2341 cacaataggg gatggcgagt cagaatagtt ccggatgaac tgacaaccat cttccctgaa
 2401 tggaaatgtg tggcgcgcga gtacgtccag cttaacatcg ccgccaagga gcgcgcggac
 2461 aaggaaaaga accaaaccat gcgctccatc gccaagcttc tgtccaatgc cctttatgga
 2521 tcatttgcca ccaagctgga caacaagaag attgtgtttt ctgaccagat ggacgagagt
 2581 cttatgaaag gcgtctctgc tggtactgtc aatatcaaat cctcctcgtt cctagaaact
 2641 gacaacctga gtgcagaggt catgcccgcc ttcgagaggg aatacctacc ccaacagctg
 2701 gcgctcctgg acagcgatcc tgaagacagt gaggacgaac agaggcccgc ccccttttat
 2761 acccccccgg cggggacccc tggtcacgtg gcctacactt acaagccaat cacattcttg
 2821 gatgtggagg agggggacat gtgtttacat accgtagaga aggtggaccc actggttgac
 2881 aacgaccgct acccctccca cgtggcctcc tttgtgctgg cctggacacg cgcttttgta
  2941 tcagagtggg ctgggttcct ctacgaagag gaccgaggca ctccgctcga ggacaggccc
 3001 ataaagtcgg tctacgggga cacggacagc ctctttgtca cccagcgggg acacgaactc
 3061 atggaaacca aaggtaagaa acgcatcaaa aaacatggcg gaaaacttgt ttttgacccc
 3121 gatgagccgg atctgacctg gctcgtggag tgcgaaaccg tctgcgcctc ctgcggtgcg
 3181 gatgcatact cccccgaatc cattttcctc gcgcccaagc tgtatgccct caaatgtatc
 3241 tactgccccg cctgccataa aacttccaaa ggtaagctcc gtgccaaagg ccacgcggcc
 3301 gaggcgctca actacgaact catggtaaac tgctacctgg ccgacctgca gggcgccgat
 3361 cggcagcggt tctcgaccag caggatgagt ctgaagcgca ccctcgcaag cgcccaacca
 3421 ggcgcgcacc ccttcaccgt gacggaaaca accctgactc ggacgctgcg accatggaag
 3481 gatcggaccc tagcagcgct ggacgcccat cgtctgattc cctactccag gagccgtccc
 3541 aacccgcgaa acgaggaggt ctgttggatc gagatgccat ag
//