LOCUS AC_000008 3597 bp DNA linear VRL 03-APR-2008
DEFINITION Human adenovirus 5.
ACCESSION AC_000008 REGION: complement(join(5197..8784,14111..14119))
VERSION AC_000008.1 GI:56160529
KEYWORDS .
SOURCE Human adenovirus 5
 ORGANISM Human adenovirus 5
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus;
 Human adenovirus C.
REFERENCE 1 (bases 1 to 3597)
 AUTHORS Davison,A.J., Benko,M. and Harrach,B.
 TITLE Genetic content and evolution of adenoviruses
 JOURNAL J. Gen. Virol. 84 (Pt 11), 2895-2908 (2003)
 PUBMED 14573794
REFERENCE 2 (bases 1 to 3597)
 AUTHORS Chroboczek,J., Bieber,F. and Jacrot,B.
 TITLE The sequence of the genome of adenovirus type 5 and its comparison
 with the genome of adenovirus type 2
 JOURNAL Virology 186 (1), 280-285 (1992)
 PUBMED 1727603
REFERENCE 3 (bases 1 to 3597)
 AUTHORS Davison,A.J.
 TITLE Direct Submission
 JOURNAL Submitted (03-MAY-2002) MRC Virology Unit, Church Street, Glasgow
 G11 5JR, U.K.
COMMENT INFERRED REFSEQ: This record is predicted by genome sequence
 analysis and is not yet supported by experimental evidence. The
 reference sequence was derived from BK000408.
 On Oct 3, 2005 this sequence version replaced gi:33694637.
 This record represents an alternative annotation for M73260 M29978.
 It is included in the NCBI RefSeq collection as an alternative to
 the reference sequence NC_001405.
 COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
 1-35938 M73260.1 1-35935
FEATURES Location/Qualifiers
 source 1..3597
 /organism="Human adenovirus 5"
 /mol_type="genomic DNA"
 /serotype="Human adenovirus type 5"
 /db_xref="taxon:28285"
 /note="Human adenovirus C"
  CDS 1..3597
 /codon_start=1
 /product="pol"
 /protein_id="AP_000202.1"
 /db_xref="GI:56160535"
 /translation="MALAQAHRARRLHAEAPDSGDQPPRRRVRQQPTRAAPAPARARR
 RRAPAPSPGGSGAPPTSGGSPASPLLDASSKDTPAAHRPPRGTVVAPRGCGLLQAIDA
 ATNQPLEIRYHLDLARALTRLCEVNLQELPPDLTPRELQTMDSSHLRDVVIKLRPPRA
  DIWTLGSRGVVVRSTVTPLEQPDGQGQAAEVEDHQPNPPGEGLKFPLCFLVRGRQVNL
 VQDVQPVHRCQYCARFYKSQHECSARRRDFYFHHINSHSSNWWREIQFFPIGSHPRTE
 RLFVTYDVETYTWMGAFGKQLVPFMLVMKFGGDEPLVTAARDLAANLGWDRWEQDPLT
  FYCITPEKMAIGRQFRTFRDHLQMLMARDLWSSFVASNPHLADWALSEHGLSSPEELT
 YEELKKLPSIKGIPRFLELYIVGHNINGFDEIVLAAQVINNRSEVPGPFRITRNFMPR
 AGKILFNDVTFALPNPRSKKRTDFLLWEQGGCDDTDFKYQYLKVMVRDTFALTHTSLR
 KAAQAYALPVEKGCCAYQAVNQFYMLGSYRSEADGFPIQEYWKDREEFVLNRELWKKK
 GQDKYDIIKETLDYCALDVQVTAELVNKLRDSYASFVRDAVGLTDASFNVFQRPTISS
 NSHAIFRQIVFRAEQPARSNLGPDLLAPSHELYDYVRASIRGGRCYPTYLGILREPLY
 VYDICGMYASALTHPMPWGPPLNPYERALAARAWQQALDLQGCKIDYFDARLLPGVFT
 VDADPPDETQLDPLPPFCSRKGGRLCWTNERLRGEVATSVDLVTLHNRGWRVHLVPDE
 RTTVFPEWRCVAREYVQLNIAAKERADRDKNQTLRSIAKLLSNALYGSFATKLDNKKI
 VFSDQMDAATLKGITAGQVNIKSSSFLETDNLSAEVMPAFQREYSPQQLALADSDAEE
 SEDERAPTPFYSPPSGTPGHVAYTYKPITFLDAEEGDMCLHTLERVDPLVDNDRYPSH
 LASFVLAWTRAFVSEWSEFLYEEDRGTPLEDRPLKSVYGDTDSLFVTERGHRLMETRG
 KKRIKKHGGNLVFDPERPELTWLVECETVCGACGADAYSPESVFLAPKLYALKSLHCP
  SCGASSKGKLRAKGHAAEGLDYDTMVKCYLADAQGEDRQRFSTSRTSLKRTLASAQPG
 AHPFTVTQTTLTRTLRPWKDMTLARLDEHRLLPYSESRPNPRNEEICWIEMP"
 CDS 1..>211
 /codon_start=1
 /product="pTP"
  /protein_id="AP_000203.1"
 /db_xref="GI:56160536"
 /translation="MALSVNDCARLTGQSVPTMEHFLPLRNIWNRVRDFPRASTTAAG
  ITWMSRYIYGYHRLMLEDLAPGAPATLRWPLYRQPPPHFLVGYQYLVRTCNDYVFDSR
 AYSRLRYTELSQPGHQTVNWSVMANCTYTINTGAYHRFVDMDDFQSTLTQVQQAILAE
 RVVADLALLQPMRGFGVTRMGGRGRHLRPNSAAAAAIDARDAGQEEGEEEVPVERLMQ
 DYYKDLRRCQNEAWGMADRLRIQQAGPKDMVLLSTIRRLKTAYFNYIISSTSARNNPD
 RRPLPPATVLSLPCDCDWLDAFLERFSDPVDADSLRSLGGGVPTQQLLRCIVSAVSLP
 HGSPPPTHNRDMTGGVFQLRPRENGRAVTETMRRRRGEMIERFVDRLPVRRRRRRVPP
 PPPPPEEEEGEALMEEEIEEEEEAPVAFEREVRDTVAELIRLLEEELTVSARNSQFFN
 FAVDFYEAMERLEALGDINESTLRRWVMYFFVAEHTATTLNYLFQRLRNYAVFARHVE
 LNLAQVVMRARDAEGGVVYSRVWNEGGLNAFSQLMARISNDLAATVERAGRGDLQEEE
 IEQFMAEIAYQDNSGDVQEILRQAAVNDTEIDSVELSFRLKLTGPVVFTQRRQIQEIN
 RRVVAFASNLRAQHQLLPARGADVPLPPLPAGPEPPLPPGARPRHRF"
 CDS join(3076..3088,3367..3597)
 /codon_start=1
 /product="IVa2"
 /protein_id="AP_000201.1"
 /db_xref="GI:56160534"
 /translation="METRGRRPAALQHQQDQPQAHPGQRAARSAPLHRDPDYADEDPA
 PVERHDPGPSGRAPTTAVQRKPPQPAKRGDMLDRDAVEQVTELWDRLELLGQTLKSMP
 TADGLKPLKNFASLQELLSLGGERLLADLVRENMRVRDMLNEVAPLLRDDGSCSSLNY
 QLHPVIGVIYGPTGCGKSQLLRNLLSSQLISPTPETVFFIAPQVDMIPPSELKAWEMQ
 ICEGNYAPGPDGTIIPQSGTLRPRFVKMAYDDLILEHNYDVSDPRNIFAQAAARGPIA
 IIMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDMAGNIAN
 LKIQSKMHLISPRMHPSQLNRFVNTYTKGLPLAISLLLKDIFRHHAQRSCYDWIIYNT
 TPQHEALQWCYLHPRDGLMPMYLNIQSHLYHVLEKIHRTLNDRDRWSRAYRARKTPK"
ORIGIN 
 1 atggccttgg ctcaagctca ccgggcccgt cgtcttcacg cagaggcgcc agattcagga
 61 gatcaaccgc cgcgtcgtcg cgttcgccag caacctacgc gcgcagcacc agctcctgcc
 121 cgcgcgcggc gccgacgtgc ccctgccccc tctcccggcg ggtccggagc cccccctacc
 181 tccgggggct cgcccgcgtc accgctttta gatgcatcat ccaaggacac ccccgcggcc
 241 caccgcccgc cgcgcggtac cgtagtcgcg ccgcggggat gcggcctctt gcaagccatc
 301 gacgccgcca ccaaccagcc cctggaaatt aggtatcacc tggatctagc ccgcgccctg
 361 acccgtctat gcgaggtaaa cctgcaggag ctcccgcctg acctgacgcc gcgggagctc
 421 cagaccatgg acagctccca tctgcgcgat gttgtcatca agctccgacc gccgcgcgcg
 481 gacatctgga ctttgggctc gcgcggcgtg gtggtccgat ccaccgtaac tcccctcgag
 541 cagccagacg gtcaaggaca agcagccgaa gtagaagacc accagccaaa cccgccaggc
 601 gaggggctca aattcccact ctgcttcctt gtgcgcggtc gtcaggtcaa cctcgtgcag
 661 gatgtacagc ccgtgcaccg ctgccagtac tgcgcacgtt tttacaaaag ccagcacgag
 721 tgttcggccc gtcgcaggga cttctacttt caccacatca atagccactc ctccaattgg
 781 tggcgggaga tccagttctt cccgatcggc tcgcatcctc gcaccgagcg tctctttgtc
 841 acctacgatg tagagaccta tacttggatg ggggcctttg ggaagcagct cgtgcccttc
 901 atgctggtca tgaagttcgg cggagatgag cctctagtga ctgccgcgcg agacctagcc
 961 gcgaaccttg gatgggaccg ctgggaacaa gacccgctta ccttctactg catcacccca
 1021 gaaaaaatgg ccataggtcg ccagtttagg acctttcgcg accacctgca aatgctaatg
 1081 gcccgtgacc tgtggagctc attcgtcgct tccaaccctc atcttgcaga ctgggccctt
 1141 tcagagcacg ggctcagctc ccctgaagag ctcacctacg aggaacttaa aaaattgcct
 1201 tccatcaagg gcatcccgcg cttcttggaa ctttacattg tgggccacaa catcaacggc
 1261 tttgacgaga tcgtgctcgc cgcccaggta attaacaacc gttccgaggt gccgggaccc
 1321 ttccgcatca cacgcaactt tatgcctcgc gcgggaaaga tactcttcaa cgatgtcacc
 1381 ttcgccctgc caaatccgcg ttccaaaaag cgcacggact ttttgctctg ggagcagggc
 1441 ggatgcgacg acactgactt caaataccag tacctcaaag tcatggtcag ggacaccttt
 1501 gcgctcaccc acacctcgct ccggaaggcc gcgcaggcat acgcgctacc cgtagaaaag
 1561 ggatgctgcg cctaccaggc cgtcaaccag ttctacatgc taggctctta ccgttcggag
 1621 gccgacgggt ttccgatcca agagtactgg aaagaccgcg aagagtttgt cctcaaccgc
 1681 gagctgtgga aaaaaaaggg acaggataag tatgacatca tcaaggaaac cctggactac
 1741 tgcgccctag acgtgcaggt caccgccgag ctggtcaaca agctgcgcga ctcctacgcc
 1801 tccttcgtgc gtgacgcggt aggtctcaca gacgccagct tcaacgtctt ccagcgtcca
 1861 accatatcat ccaactcaca tgccatcttc aggcagatag tcttccgagc agagcagccc
 1921 gcccgtagca acctcggtcc cgacctcctc gctccctcgc acgaactata cgattacgtg
 1981 cgcgccagca tccgcggtgg aagatgctac cctacatatc ttggaatact cagagagccc
 2041 ctctacgttt acgacatttg cggcatgtac gcctccgcgc tcacccaccc catgccatgg
 2101 ggtcccccac tcaacccata cgagcgcgcg cttgccgccc gcgcatggca gcaggcgcta
 2161 gacttgcaag gatgcaagat agactacttc gacgcgcgcc tgctgcccgg ggtctttacc
 2221 gtggacgcag accccccgga cgagacgcag ctagaccccc taccgccatt ctgctcgcgc
 2281 aagggcggcc gcctctgctg gaccaacgag cgcctacgcg gagaggtagc caccagcgtt
 2341 gaccttgtca ccctgcacaa ccgcggttgg cgcgtgcacc tggtgcccga cgagcgcacc
 2401 accgtctttc ccgaatggcg gtgcgttgcg cgcgaatacg tgcagctaaa catcgcggcc
 2461 aaggagcgcg ccgatcgcga caaaaaccaa accctgcgct ccatcgccaa gttgctgtcc
 2521 aacgccctct acgggtcgtt tgccaccaag cttgacaaca aaaagattgt cttttctgac
 2581 cagatggatg cggccaccct caaaggcatc accgcgggcc aggtgaatat caaatcctcc
 2641 tcgtttttgg aaactgacaa tcttagcgca gaagtcatgc ccgcttttca gagggagtac
 2701 tcaccccaac agctggccct cgcagacagc gatgcggaag agagtgagga cgaacgcgcc
 2761 cccaccccct tttatagccc cccttcagga acacccggtc acgtggccta cacctacaaa
 2821 ccaatcacct tccttgatgc cgaagagggc gacatgtgtc ttcacaccct ggagcgagtg
 2881 gaccccctag tggacaacga ccgctacccc tcccacttag cctccttcgt gctggcctgg
 2941 acgcgagcct ttgtctcaga gtggtccgag tttctatacg aggaggaccg cggaacaccg
 3001 ctcgaggaca ggcctctcaa gtctgtatac ggggacacgg acagcctttt cgtcaccgag
 3061 cgtggacacc ggctcatgga aaccagaggt aagaaacgca tcaaaaagca tgggggaaac
 3121 ctggtttttg accccgaacg gccagagctc acctggctcg tggaatgcga gaccgtctgc
  3181 ggggcctgcg gcgcggatgc ctactccccg gaatcggtat ttctcgcgcc caagctctac
 3241 gccctcaaaa gtctgcactg cccctcgtgc ggcgcctcct ccaagggcaa gctgcgcgcc
 3301 aagggccacg ccgcggaggg gctggactat gacaccatgg tcaaatgcta cctggccgac
 3361 gcgcagggcg aagaccggca gcgcttcagc accagcagga ccagcctcaa gcgcaccctg
 3421 gccagcgcgc agcccggagc gcaccccttc accgtgaccc agactacgct gacgaggacc
 3481 ctgcgcccgt ggaaagacat gaccctggcc cgtctggacg agcaccgact actgccgtac
 3541 agcgaaagcc gccccaaccc gcgaaacgag gagatatgct ggatcgagat gccgtag
//