LOCUS AJ854486 756 bp DNA linear VRL 14-NOV-2006
DEFINITION Human adenovirus type 9 complete genome.
ACCESSION AJ854486 REGION: join(571..1114,1207..1418)
VERSION AJ854486.1 GI:56237058
KEYWORDS 39.3 kDa fiber protein; 71.1 kDa preterminal protein; core protein
L2 pX; DNA binding protein; E1A 14.9 kDa protein; E1A 21.1 kDa
protein; E1A 28.2 kDa protein; E1A gene; E1B 19k protein; E1B 55k
gene; E1B 55k protein; E1B gene; E2A DBP gene; E3 10.4 K gene; E3
12.2 K gene; E3 12.2 kDa protein; E3 14.5 K gene; E3 14.5 kDa
protein; E3 14.8 K gene; E3 14.8 kDa protein; E3 18.4 K gene; E3
18.4 kDa protein; E3 21.8 K gene; E3 21.8 kDa protein; E3 33.1 K
gene; E3 45.8 K gene; E3 45.8 kDa protein; E3 9.0 K gene; E3 9.6 K
gene; E3 orf 4 10.4 kDa protein; E3 orf1 9.0 kDa protein; E3 orf2
9.6kDa protein; E3 orf3 33.1 kDa protein; E4 13.6 K gene; E4 14.0 K
gene; E4 14.2 K gene; E4 14.5 K gene; E4 17 K gene; E4 17.0 kDa; E4
34.1 K gene; E4 orf 3 13.6 kDa protein; E4 orf1 14.0 kDa protein;
E4 orf2 14.5 kDa protein; E4 orf4 14.2 kDa protein; E4 orf6 34.1
kDa protein; hexon protein; L1 52/55k 42.2 kDa protein; L1 52/55k
gene; L1 pIIIa 62.1 kDa protein; L1 pIIIa gene; L2 pV gene; L2 pVII
gene; L2 pX gene; L2-pIII gene; L3 23.6 kDa protease; L3 gene; L3
pII gene; L3 pVI gene; L3 pVI protein; L4 100k gene; L4 100kDa
protein; L4 22k gene; L4 22kDa protein; L4 pVIII gene; L4 pVIII
protein; L5 pIV gene; major core protein L2 pVII; minor core
protein L2 pV; penton; pIVa2 gene; pIVa2 protein; pIX gene; pIX
protein; polymerase; pTP gene; VAI RNA; VAII RNA.
SOURCE Human adenovirus 9
ORGANISM Human adenovirus 9
Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus;
Human adenovirus D.
REFERENCE 1
AUTHORS Buettner,W.H. and Veres-Molnar,S.K.
TITLE Adenovirus type 9, complete sequence
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 756)
AUTHORS Buettner,W.H.
TITLE Direct Submission
JOURNAL Submitted (07-NOV-2004) Buettner W.H., Special Medical
Microbiology, Georg-August-University Goettingen, Humboldtallee 34,
37073 Goettingen, GERMANY
FEATURES Location/Qualifiers
source 1..756
/organism="Human adenovirus 9"
/virion
/mol_type="genomic DNA"
/strain="type strain: ATCC VR-1086 = Hicks = NIAID
V-209-003-014"
/serotype="9"
/db_xref="taxon:10527"
gene <1..>756
/gene="E1A"
mRNA <1..>756
/gene="E1A"
mRNA join(<1..358,545..>756)
/gene="E1A"
mRNA join(<1..37,206..358,545..>756)
/gene="E1A"
CDS 1..756
/gene="E1A"
/note="alternative splice variant"
/codon_start=1
/product="E1A 28.2 kDa protein"
/protein_id="CAI05953.1"
/db_xref="GI:56237059"
/db_xref="GOA:Q9YLA2"
/db_xref="InterPro:IPR003853"
/db_xref="UniProtKB/TrEMBL:Q9YLA2"
/translation="MRHLRLLPSTVPGELAVLMLEDFVDTVLEDELHPSPFELGPTLQ
DLYDLEVDAHDDDPNEEAVNLIFPESMILQADIANESTPLHTPTLSPIPELEEEDELD
LRCYEEGFPPSDSEDERGEQTMALISDYACVIVEEQDVIEKSTEPVQGCRNCQYHRDK
SGDVNASCALCYMKQTFSFIYSPVSEDELSPSEEDHPSPPELSGETPLQVFRPTPVRP
SGERRAAVDKIEDLLQDMGGDEPLDLSLKRPRN"
CDS join(1..358,545..756)
/gene="E1A"
/note="alternative splice variant"
/codon_start=1
/product="E1A 21.1 kDa protein"
/protein_id="CAI05954.1"
/db_xref="GI:56237060"
/db_xref="GOA:Q9YLA0"
/db_xref="InterPro:IPR003853"
/db_xref="UniProtKB/TrEMBL:Q9YLA0"
/translation="MRHLRLLPSTVPGELAVLMLEDFVDTVLEDELHPSPFELGPTLQ
DLYDLEVDAHDDDPNEEAVNLIFPESMILQADIANESTPLHTPTLSPIPELEEEDELD
LRCYEEGFPPSDSEDERGPVSEDELSPSEEDHPSPPELSGETPLQVFRPTPVRPSGER
RAAVDKIEDLLQDMGGDEPLDLSLKRPRN"
CDS join(1..37,206..358,545..756)
/gene="E1A"
/note="alternative splice variant"
/codon_start=1
/product="E1A 14.9 kDa protein"
/protein_id="CAI05955.1"
/db_xref="GI:56237061"
/db_xref="GOA:Q9YLA1"
/db_xref="InterPro:IPR003853"
/db_xref="UniProtKB/TrEMBL:Q9YLA1"
/translation="MRHLRLLPSTVPESMILQADIANESTPLHTPTLSPIPELEEEDE
LDLRCYEEGFPPSDSEDERGPVSEDELSPSEEDHPSPPELSGETPLQVFRPTPVRPSG
ERRAAVDKIEDLLQDMGGDEPLDLSLKRPRN"
exon <1..544
/gene="E1A"
/number=1
exon <1..358
/gene="E1A"
/number=1a
exon <1..37
/gene="E1A"
/number=1b
intron 38..205
/gene="E1A"
/number=1b
exon 206..358
/gene="E1A"
/number=1c
intron 359..>544
/gene="E1A"
/number=1a
exon 545..>756
/gene="E1A"
/number=2
ORIGIN
1 atgagacacc tgcgcctcct gccttcaact gtgcccggtg agctggctgt gcttatgctg
61 gaggactttg tggatacagt attggaggac gaactgcatc caagtccgtt cgagctggga
121 cccacacttc aggatctcta tgatctggag gtagatgccc atgatgacga ccctaacgag
181 gaggctgtga atttaatatt tccagaatct atgattcttc aggctgacat agccaacgaa
241 tctactccac ttcatacacc gactctgtca cccatacctg aattggaaga ggaggacgaa
301 ctagacctcc ggtgttatga ggaaggtttt cctcccagcg attcagagga tgaacggggt
361 gagcagacca tggctctgat ctcagactat gcttgtgtga ttgtggagga gcaagatgtg
421 attgaaaaat ctactgagcc agtacaaggc tgtaggaact gccagtacca ccgggataag
481 tccggagatg tgaacgcctc ctgcgctttg tgctatatga aacagacttt cagctttatt
541 tacagtccgg tgtcagagga tgagttatca ccctcagaag aagaccaccc gtctccccct
601 gagctgtcag gcgaaacgcc cctgcaagtg ttcagaccca ccccagtcag acccagtggc
661 gagaggcgag cggctgttga caaaattgag gacttgttgc aggacatggg tggggatgaa
721 cctttggacc tgagcttgaa acgccccagg aactag
//