LOCUS AJ854486 1347 bp DNA linear VRL 14-NOV-2006
DEFINITION Human adenovirus type 9 complete genome.
ACCESSION AJ854486 REGION: complement(join(3899..5232,5511..5523))
VERSION AJ854486.1 GI:56237058
KEYWORDS 39.3 kDa fiber protein; 71.1 kDa preterminal protein; core protein
L2 pX; DNA binding protein; E1A 14.9 kDa protein; E1A 21.1 kDa
protein; E1A 28.2 kDa protein; E1A gene; E1B 19k protein; E1B 55k
gene; E1B 55k protein; E1B gene; E2A DBP gene; E3 10.4 K gene; E3
12.2 K gene; E3 12.2 kDa protein; E3 14.5 K gene; E3 14.5 kDa
protein; E3 14.8 K gene; E3 14.8 kDa protein; E3 18.4 K gene; E3
18.4 kDa protein; E3 21.8 K gene; E3 21.8 kDa protein; E3 33.1 K
gene; E3 45.8 K gene; E3 45.8 kDa protein; E3 9.0 K gene; E3 9.6 K
gene; E3 orf 4 10.4 kDa protein; E3 orf1 9.0 kDa protein; E3 orf2
9.6kDa protein; E3 orf3 33.1 kDa protein; E4 13.6 K gene; E4 14.0 K
gene; E4 14.2 K gene; E4 14.5 K gene; E4 17 K gene; E4 17.0 kDa; E4
34.1 K gene; E4 orf 3 13.6 kDa protein; E4 orf1 14.0 kDa protein;
E4 orf2 14.5 kDa protein; E4 orf4 14.2 kDa protein; E4 orf6 34.1
kDa protein; hexon protein; L1 52/55k 42.2 kDa protein; L1 52/55k
gene; L1 pIIIa 62.1 kDa protein; L1 pIIIa gene; L2 pV gene; L2 pVII
gene; L2 pX gene; L2-pIII gene; L3 23.6 kDa protease; L3 gene; L3
pII gene; L3 pVI gene; L3 pVI protein; L4 100k gene; L4 100kDa
protein; L4 22k gene; L4 22kDa protein; L4 pVIII gene; L4 pVIII
protein; L5 pIV gene; major core protein L2 pVII; minor core
protein L2 pV; penton; pIVa2 gene; pIVa2 protein; pIX gene; pIX
protein; polymerase; pTP gene; VAI RNA; VAII RNA.
SOURCE Human adenovirus 9
ORGANISM Human adenovirus 9
Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus;
Human adenovirus D.
REFERENCE 1
AUTHORS Buettner,W.H. and Veres-Molnar,S.K.
TITLE Adenovirus type 9, complete sequence
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1347)
AUTHORS Buettner,W.H.
TITLE Direct Submission
JOURNAL Submitted (07-NOV-2004) Buettner W.H., Special Medical
Microbiology, Georg-August-University Goettingen, Humboldtallee 34,
37073 Goettingen, GERMANY
FEATURES Location/Qualifiers
source 1..1347
/organism="Human adenovirus 9"
/virion
/mol_type="genomic DNA"
/strain="type strain: ATCC VR-1086 = Hicks = NIAID
V-209-003-014"
/serotype="9"
/db_xref="taxon:10527"
CDS <13..>14
/codon_start=1
/product="polymerase"
/protein_id="CAI05960.1"
/db_xref="GI:56237066"
/db_xref="GOA:Q5TJ13"
/db_xref="InterPro:IPR004868"
/db_xref="InterPro:IPR006172"
/db_xref="InterPro:IPR012337"
/db_xref="UniProtKB/TrEMBL:Q5TJ13"
/translation="MQCVDTTTNSPVEIKYHLHLKHALTRLYEVNLRTLPPDLDLRDT
MDSSQLRALVFALRPRRAEIWTWLPRGLVSLSVLEEPQGESHAGEHESHQPGPPLLKF
LLKGRAVYLVDEVQPVQRCEYCGRFYKHQHECSVRRRDFYFHHINSHSSNWWQEIQFF
PIGSHPRTERLFVTYDVETYTWMGSFGKQLVPFMLVMKFSGEPELVALARDLAVRLRW
DRWERDPLTFYCVTPEKMAVGQQFRLFRDELQTLMARELWASFMQANPHLQEWALEQH
GLQCPEDLTYEELKKLPHIKGRPRFMELYIVGHNINGFDEIVLAAQVINNRASVPGPF
RITRNFMPRAGKILFNDVTFALPNPLSKKRTDFELWEHGGCDDSDFKYQFLKVMVRDT
FALTHTSLRKAAQAYALPVEKGCCPYKAVNHFYMLGSYRADDRGFPLREYWKDDEEYA
LNRELWEKKGEAGYDIIRETLDYCAMDVLVTAELVAKLQDSYAHFIRDSVRLPHAHFN
IFQRPTISSNSHAIFRQIVFRAEQPQRTNLGPAFLAPSHELYDYVRASIRGGRCYPTY
IGILSEPIYVYDICGMYASALTHPMPWGPPLNPYERALAAREWQMALDDASSKIDYFD
KELCPGIFTIDADPPDEHLLDVLPPFCSRKGGRLCWTNEPLRGEVATSVDLVTLHNRG
WRVRIVPDERTTVFPEWKCVAREYVQLNIAAKERADRDKNQTMRSIAKLLSNALYGSF
ATKLDNKKIVFSDQMDESLLKSIAAGQANIKSSSFLETDNLSAEVMPALEREYLPQQL
ALVDSDAEESEDEHRPAPFYTPPSGTPGHVAYTYKPITFLDAEEGDMCLHTVEKVDPL
VDNDRYPSHVASFVLAWTRAFVSEWSEFLYEEDRGTPLQDRPIKSVYGDTDSLFVTER
GHRLMETRGKKRIKKNGGKLVFDPEQPELTWLVECETVCAHCGADAFAPESVFLAPKL
YALQSLLCPACGRSSKGKLRAKGHAAEALNYELMVNCYLADSQGEDRARFSTSRMSLK
RTLASAQPGAHPFTVTETTLTRTLRPWKDMTLAALDAHRLVPYSRSRPNPRNEEVCWI
EMP"
gene <13..>14
/gene="pIVa2"
mRNA 1..1347
/gene="pIVa2"
CDS 1..1347
/gene="pIVa2"
/codon_start=1
/product="pIVa2 protein"
/protein_id="CAI05959.1"
/db_xref="GI:56237065"
/db_xref="GOA:Q5TJ14"
/db_xref="InterPro:IPR003389"
/db_xref="InterPro:IPR003593"
/db_xref="UniProtKB/TrEMBL:Q5TJ14"
/translation="METRGRRPCPFQHQQDESQAHPCKRPARGPPLHRDGDHPHSDPE
TLEGHDAGRAGRPSSRALQSQSSQPPKRGSLLDRDAVEHVTELWDRLELLSQTLAKMP
MADGLKPLKNFASLQELLSLGGDRLLGELVRENLQVRDMLNEVAPLLRDDGSCMSLNY
HLQPVIGVIYGPTGCGKSQLLRNLLSSQLITPAPETVFFIAPQVDMIPPSEMKAWEMQ
ICEGNFAPGPEGTIVPQSGTLRPKFIKMSYDDLTQEHNYDVSDPRNVFAKAAAHGPIA
IIMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIAN
LKIQAKLHIISPRMHPSQLNRFANTYTKGLPVAISLLLKDIIQHHAQRPCYDWIIYNT
TPEHEAMQWCYLHPRDGLMPMYLNIQSHLYRVLEKIHRTLNDRERWTRAYRARKNK"
exon 1..>13
/gene="pIVa2"
/number=1
exon <14..1347
/gene="pIVa2"
/number=2
gene <1346..1347
/gene="E2B"
polyA_signal <1346..1347
/gene="E2B"
ORIGIN
1 atggagacgc gagggcgaag accgtgcccg tttcagcacc agcaggatga gtctcaagcg
61 cacccttgca agcgcccagc caggggccca ccccttcacc gtgacggaga ccaccctcac
121 tcggaccctg agaccctgga aggacatgac gctggccgcg ctggacgccc atcgtctcgt
181 gccctacagt cgcagtcgtc ccaacccccg aaacgaggaa gtctgctgga tcgagatgcc
241 gtagagcacg tcaccgagct ctgggaccgc ctggagctcc tctcgcagac cctcgccaag
301 atgcccatgg ccgacggact caagcccctg aaaaactttg cttccctgca agagctcctc
361 tcgctgggcg gggaccgcct cctcggcgag ctcgttcggg aaaacctcca agtcagagac
421 atgctcaacg aggtggcccc cctcctccgg gacgacggca gctgcatgtc cttgaactac
481 cacctgcaac ccgtcatcgg ggtcatctac ggcccgaccg ggtgcggcaa gtcccagctg
541 ttgagaaacc tgctctcttc gcagctcatc accccagccc cggaaaccgt ttttttcatc
601 gccccgcagg tggacatgat ccccccctcc gagatgaaag cctgggagat gcagatctgt
661 gaggggaact tcgccccggg gcccgaggga accatcgtcc cccaatctgg caccctccgc
721 cccaaattca ttaaaatgtc ttatgatgat ctcacccagg agcataatta tgatgtatct
781 gaccccagaa acgtctttgc caaagccgca gcccacgggc ccatcgccat catcatggat
841 gaatgcatgg aaaacctggg cgggcacaag ggcgtctcca aattcttcca cgcattccct
901 tccaagttgc atgacaagtt ccccaagtgc acgggctaca ccgtcctggt ggtcctgcac
961 aacatgaacc cccggcggga tctgggtggc aacatcgcca acctcaagat ccaggccaaa
1021 ctgcacatca tctccccccg catgcatccc tcccagctca accgcttcgc caatacctac
1081 accaaggggc tccccgtggc catcagtctc cttctcaaag acatcatcca gcaccacgcc
1141 cagcgcccct gctatgactg gatcatctac aacacgaccc cagagcacga ggccatgcag
1201 tggtgctacc tccacccccg ggacgggctc atgcccatgt acctcaacat ccaatcccac
1261 ctctaccggg tcctggaaaa aatccaccgc actctcaatg atcgggagag gtggaccagg
1321 gcctaccgcg cgcgaaaaaa taaataa
//