LOCUS       AJ854486                3276 bp    DNA     linear   VRL 14-NOV-2006
DEFINITION  Human adenovirus type 9 complete genome.
ACCESSION   AJ854486 REGION: 5002..8277
VERSION     AJ854486.1  GI:56237058
KEYWORDS    39.3 kDa fiber protein; 71.1 kDa preterminal protein; core protein
            L2 pX; DNA binding protein; E1A 14.9 kDa protein; E1A 21.1 kDa
            protein; E1A 28.2 kDa protein; E1A gene; E1B 19k protein; E1B 55k
            gene; E1B 55k protein; E1B gene; E2A DBP gene; E3 10.4 K gene; E3
            12.2 K gene; E3 12.2 kDa protein; E3 14.5 K gene; E3 14.5 kDa
            protein; E3 14.8 K gene; E3 14.8 kDa protein; E3 18.4 K gene; E3
            18.4 kDa protein; E3 21.8 K gene; E3 21.8 kDa protein; E3 33.1 K
            gene; E3 45.8 K gene; E3 45.8 kDa protein; E3 9.0 K gene; E3 9.6 K
            gene; E3 orf 4 10.4 kDa protein; E3 orf1 9.0 kDa protein; E3 orf2
            9.6kDa protein; E3 orf3 33.1 kDa protein; E4 13.6 K gene; E4 14.0 K
            gene; E4 14.2 K gene; E4 14.5 K gene; E4 17 K gene; E4 17.0 kDa; E4
            34.1 K gene; E4 orf 3 13.6 kDa protein; E4 orf1 14.0 kDa protein;
            E4 orf2 14.5 kDa protein; E4 orf4 14.2 kDa protein; E4 orf6 34.1
            kDa protein; hexon protein; L1 52/55k 42.2 kDa protein; L1 52/55k
            gene; L1 pIIIa 62.1 kDa protein; L1 pIIIa gene; L2 pV gene; L2 pVII
            gene; L2 pX gene; L2-pIII gene; L3 23.6 kDa protease; L3 gene; L3
            pII gene; L3 pVI gene; L3 pVI protein; L4 100k gene; L4 100kDa
            protein; L4 22k gene; L4 22kDa protein; L4 pVIII gene; L4 pVIII
            protein; L5 pIV gene; major core protein L2 pVII; minor core
            protein L2 pV; penton; pIVa2 gene; pIVa2 protein; pIX gene; pIX
            protein; polymerase; pTP gene; VAI RNA; VAII RNA.
SOURCE      Human adenovirus 9
  ORGANISM  Human adenovirus 9
            Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus;
            Human adenovirus D.
REFERENCE   1
  AUTHORS   Buettner,W.H. and Veres-Molnar,S.K.
  TITLE     Adenovirus type 9, complete sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3276)
  AUTHORS   Buettner,W.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2004) Buettner W.H., Special Medical
            Microbiology, Georg-August-University Goettingen, Humboldtallee 34,
            37073 Goettingen, GERMANY
FEATURES             Location/Qualifiers
     source          1..3276
                     /organism="Human adenovirus 9"
                     /virion
                     /mol_type="genomic DNA"
                     /strain="type strain: ATCC VR-1086 = Hicks = NIAID
                     V-209-003-014"
                     /serotype="9"
                     /db_xref="taxon:10527"
     gene            complement(<1..>522)
                     /gene="pIVa2"
     mRNA            complement(join(<1..231,510..>522))
                     /gene="pIVa2"
     CDS             complement(join(<1..231,510..522))
                     /gene="pIVa2"
                     /codon_start=1
                     /product="pIVa2 protein"
                     /protein_id="CAI05959.1"
                     /db_xref="GI:56237065"
                     /db_xref="GOA:Q5TJ14"
                     /db_xref="InterPro:IPR003389"
                     /db_xref="InterPro:IPR003593"
                     /db_xref="UniProtKB/TrEMBL:Q5TJ14"
                     /translation="METRGRRPCPFQHQQDESQAHPCKRPARGPPLHRDGDHPHSDPE
                     TLEGHDAGRAGRPSSRALQSQSSQPPKRGSLLDRDAVEHVTELWDRLELLSQTLAKMP
                     MADGLKPLKNFASLQELLSLGGDRLLGELVRENLQVRDMLNEVAPLLRDDGSCMSLNY
                     HLQPVIGVIYGPTGCGKSQLLRNLLSSQLITPAPETVFFIAPQVDMIPPSEMKAWEMQ
                     ICEGNFAPGPEGTIVPQSGTLRPKFIKMSYDDLTQEHNYDVSDPRNVFAKAAAHGPIA
                     IIMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIAN
                     LKIQAKLHIISPRMHPSQLNRFANTYTKGLPVAISLLLKDIIQHHAQRPCYDWIIYNT
                     TPEHEAMQWCYLHPRDGLMPMYLNIQSHLYRVLEKIHRTLNDRERWTRAYRARKNK"
     exon            complement(<1..231)
                     /gene="pIVa2"
                     /number=2
     CDS             complement(1..3276)
                     /codon_start=1
                     /product="polymerase"
                     /protein_id="CAI05960.1"
                     /db_xref="GI:56237066"
                     /db_xref="GOA:Q5TJ13"
                     /db_xref="InterPro:IPR004868"
                     /db_xref="InterPro:IPR006172"
                     /db_xref="InterPro:IPR012337"
                     /db_xref="UniProtKB/TrEMBL:Q5TJ13"
                     /translation="MQCVDTTTNSPVEIKYHLHLKHALTRLYEVNLRTLPPDLDLRDT
                     MDSSQLRALVFALRPRRAEIWTWLPRGLVSLSVLEEPQGESHAGEHESHQPGPPLLKF
                     LLKGRAVYLVDEVQPVQRCEYCGRFYKHQHECSVRRRDFYFHHINSHSSNWWQEIQFF
                     PIGSHPRTERLFVTYDVETYTWMGSFGKQLVPFMLVMKFSGEPELVALARDLAVRLRW
                     DRWERDPLTFYCVTPEKMAVGQQFRLFRDELQTLMARELWASFMQANPHLQEWALEQH
                     GLQCPEDLTYEELKKLPHIKGRPRFMELYIVGHNINGFDEIVLAAQVINNRASVPGPF
                     RITRNFMPRAGKILFNDVTFALPNPLSKKRTDFELWEHGGCDDSDFKYQFLKVMVRDT
                     FALTHTSLRKAAQAYALPVEKGCCPYKAVNHFYMLGSYRADDRGFPLREYWKDDEEYA
                     LNRELWEKKGEAGYDIIRETLDYCAMDVLVTAELVAKLQDSYAHFIRDSVRLPHAHFN
                     IFQRPTISSNSHAIFRQIVFRAEQPQRTNLGPAFLAPSHELYDYVRASIRGGRCYPTY
                     IGILSEPIYVYDICGMYASALTHPMPWGPPLNPYERALAAREWQMALDDASSKIDYFD
                     KELCPGIFTIDADPPDEHLLDVLPPFCSRKGGRLCWTNEPLRGEVATSVDLVTLHNRG
                     WRVRIVPDERTTVFPEWKCVAREYVQLNIAAKERADRDKNQTMRSIAKLLSNALYGSF
                     ATKLDNKKIVFSDQMDESLLKSIAAGQANIKSSSFLETDNLSAEVMPALEREYLPQQL
                     ALVDSDAEESEDEHRPAPFYTPPSGTPGHVAYTYKPITFLDAEEGDMCLHTVEKVDPL
                     VDNDRYPSHVASFVLAWTRAFVSEWSEFLYEEDRGTPLQDRPIKSVYGDTDSLFVTER
                     GHRLMETRGKKRIKKNGGKLVFDPEQPELTWLVECETVCAHCGADAFAPESVFLAPKL
                     YALQSLLCPACGRSSKGKLRAKGHAAEALNYELMVNCYLADSQGEDRARFSTSRMSLK
                     RTLASAQPGAHPFTVTETTLTRTLRPWKDMTLAALDAHRLVPYSRSRPNPRNEEVCWI
                     EMP"
     intron          complement(232..509)
                     /gene="pIVa2"
                     /number=1
     exon            complement(510..>522)
                     /gene="pIVa2"
                     /number=1
     TATA_signal     822..825
                     /note="major late promoter"
     misc_feature    853..893
                     /note="tripartite leader sequence; 1st leader"
     misc_feature    1915..1986
                     /note="tripartite leader sequence; 2nd leader"
ORIGIN      
        1 ctacggcatc tcgatccagc agacttcctc gtttcggggg ttgggacgac tgcgactgta
       61 gggcacgaga cgatgggcgt ccagcgcggc cagcgtcatg tccttccagg gtctcagggt
      121 ccgagtgagg gtggtctccg tcacggtgaa ggggtgggcc cctggctggg cgcttgcaag
      181 ggtgcgcttg agactcatcc tgctggtgct gaaacgggca cggtcttcgc cctgcgagtc
      241 ggcgagatag cagttgacca tgagctcgta gttgagggcc tcggcggcgt ggcccttggc
      301 gcggagcttg cccttggaag agcgcccgca ggcgggacag aggagggatt gcagggcgta
      361 gagcttgggg gcgagaaaga cggactcggg agcgaaagcg tccgctccgc agtgggcgca
      421 gacggtctcg cactcgacga gccaggtgag ctctggctgc tcggggtcaa aaaccagttt
      481 tcccccgttc tttttgatgc gcttcttacc tcgcgtctcc atgagtctgt gtccgcgctc
      541 ggtgacaaac aggctgtcgg tgtccccgta gacggacttg attggcctgt cctgcagggg
      601 cgtcccgcgg tcctcctcgt agagaaactc ggaccactct gagacaaagg cgcgcgtcca
      661 cgccaagaca aaggaggcca cgtgcgaggg gtagcggtcg ttgtccacta gggggtccac
      721 cttttccacc gtgtgcagac acatgtcccc ctcctccgca tccaagaagg tgattggctt
      781 gtaggtgtag gccacgtgac cgggggtccc cgacgggggg gtataaaagg gggcgggtct
      841 gtgctcgtcc tcactctctt ccgcgtcgct gtccacgagc gccagctgtt ggggtaggta
      901 ttccctctcg agagcgggca tgacctcggc actcaggttg tcagtttcta gaaacgagga
      961 ggatttgatg ttggcttgcc ctgccgcgat gctttttagg agactttcat ccatctggtc
     1021 agaaaagact atttttttat tgtcaagctt ggtggcgaag gagccataga gggcgttgga
     1081 tagaagcttg gcgatggatc tcatggtctg atttttgtca cggtcggcgc gctccttggc
     1141 cgcgatgttt agctggacat actcgcgcgc gacgcacttc cattcgggga agacggtggt
     1201 gcgctcgtcg ggcacgatcc tgacgcgcca gccgcggtta tgcagggtga ccaggtccac
     1261 gctggtggcc acctcgccgc gcaggggctc gttggtccag cagagtctgc cgcccttgcg
     1321 cgagcagaac gggggcagca catcaagcag atgctcgtca ggggggtccg catcgatggt
     1381 gaagatgccc ggacagagtt ccttgtcaaa ataatcgatt tttgaggatg catcatccaa
     1441 ggccatctgc cactcgcggg cggccagcgc tcgctcgtag gggttgaggg gcggacccca
     1501 gggcatggga tgagtgaggg cggaggcgta catgccgcag atgtcgtaga catagatggg
     1561 ctccgagagg atgccgatgt aggtgggata acagcgcccc ccgcggatgc tggcgcgcac
     1621 gtagtcatac aactcgtgcg agggggccaa gaaggcgggg ccgagattgg tgcgctgggg
     1681 ctgctcggcg cggaagacga tctggcgaaa gatggcgtgc gagttggagg agatggtggg
     1741 ccgttggaag atgttaaagt gggcgtgggg caagcggacc gagtcgcgga tgaagtgcgc
     1801 gtaggagtct tgcagcttgg cgacgagctc ggcggtgacg aggacgtcca tggcgcagta
     1861 gtccagcgtt tcgcggatga tgtcataacc cgcctctcct ttcttctccc acagctcgcg
     1921 gttgagggcg tactcctcgt catccttcca gtactcccgg agcgggaatc ctcgatcgtc
     1981 cgcacggtaa gagcccagca tgtagaaatg gttcacggcc ttgtagggac agcagccctt
     2041 ctccacgggg agggcgtaag cttgagcggc cttgcggagc gaggtgtgcg tcagggcgaa
     2101 ggtgtccctg accatgactt tcaagaactg gtacttgaaa tccgagtcgt cgcagccgcc
     2161 gtgctcccag agctcgaaat cggtgcgctt cttcgagagg gggttaggca gagcgaaagt
     2221 gacgtcattg aagagaatct tgcctgctcg cggcatgaaa ttgcgggtga tgcggaaagg
     2281 gcccgggacg gaggctcggt tgttgatcac ctgggcggca aggacgatct cgtcgaagcc
     2341 gttgatgttg tgcccgacga tgtagagttc catgaatcgc gggcggcctt tgatgtgcgg
     2401 cagctttttg agctcctcgt aggtgaggtc ctcggggcat tgcaggccgt gctgctctag
     2461 cgcccactcc tggagatgtg ggttggcttg catgaaggaa gcccagagct cgcgggccat
     2521 gagggtctgg agctcgtcgc gaaagaggcg gaactgctgg cccacggcca tcttttctgg
     2581 ggtgacgcag tagaaggtga gggggtcccg ctcccagcga tcccagcgta agcgcacggc
     2641 gagatcgcga gcgagggcga ccagctcggg ttcccccgag aatttcatga ccagcatgaa
     2701 ggggacgagc tgcttgccga aggaccccat ccaggtgtag gtttctacat cgtaggtgac
     2761 aaagagccgc tccgtgcgag gatgagagcc gattgggaag aactggattt cctgccacca
     2821 gttggacgag tggctgttga tgtgatgaaa gtagaaatcc cgccggcgaa ccgagcactc
     2881 gtgctgatgc ttgtaaaagc gtccgcagta ctcgcagcgc tgcacgggct gtacctcatc
     2941 cacgagatac acagcgcgtc ccttgaggag gaacttcagg agtggcggcc ctggctggtg
     3001 gctttcatgt tcgcctgcgt gggactcacc ctggggctcc tcgaggacgg agaggctgac
     3061 gagcccgcgc gggagccagg tccagatctc ggcgcggcgg gggcggagag cgaagacgag
     3121 ggcgcgcagt tgggagctgt ccatggtgtc gcggagatcc aggtccgggg gcagggttct
     3181 gaggttgacc tcgtagaggc gggtgagggc gtgcttgaga tgcagatggt acttgatctc
     3241 cacgggtgag ttggtggtcg tgtccacgca ttgcat
//