LOCUS AY487947 1347 bp DNA linear VRL 20-OCT-2004
DEFINITION Human adenovirus E, complete genome.
ACCESSION AY487947 REGION: complement(join(3930..5263,5542..5554))
VERSION AY487947.1 GI:45504790
KEYWORDS .
SOURCE Human adenovirus E (HAdV-E)
 ORGANISM Human adenovirus E
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 1347)
 AUTHORS Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
 Wilkinson,G.W.G.
 TITLE Characterization and manipulation of the human adenovirus 4 genome
 JOURNAL J. Gen. Virol. 85 (11), 3361-3366 (2004)
 PUBMED 15483252
REFERENCE 2 (bases 1 to 1347)
 AUTHORS Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
 Wilkinson,G.W.G.
 TITLE Direct Submission
 JOURNAL Submitted (26-NOV-2003) University of Wales College of Medicine,
 Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
 U.K.
REFERENCE 3 (bases 1 to 1347)
 AUTHORS Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
 Wilkinson,G.W.G.
 TITLE Direct Submission
 JOURNAL Submitted (30-JUN-2004) University of Wales College of Medicine,
 Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
 U.K.
FEATURES Location/Qualifiers
 source 1..1347
 /organism="Human adenovirus E"
 /mol_type="genomic DNA"
 /strain="vaccine (CL 68578)"
 /serotype="human adenovirus 4"
 /db_xref="taxon:130308"
 /note="acronym: HAdV-4; acronym: HAdV-E"
 gene <13..>14
 /gene="E2B"
 /inference="non-experimental evidence, no additional
 details recorded"
 mRNA <13..>14
 /gene="E2B"
 /product="pol"
 /inference="non-experimental evidence, no additional
 details recorded"
 mRNA <13..>14
 /gene="E2B"
 /product="pTP"
 /inference="non-experimental evidence, no additional
 details recorded"
 CDS <13..>14
 /gene="E2B"
 /inference="non-experimental evidence, no additional
 details recorded"
 /codon_start=1
 /product="pol"
  /protein_id="AAS66917.1"
 /db_xref="GI:45504797"
 /translation="MALVQTHGSRGLHPEASDPGRQPSRRRSRQSSPGAVPEPARARR
  RRAPATTASGSRAAPTARRASSPPLLTMEAKPLPPAKKKRGTVVTPQGHGTLQAIDVA
 TNGAVEIKYHLDLPRALEKLLQVNRAPPLPTDLTPQRLRTLDSSGLRALVLALRPVRA
 EVWTCLPRGLVSMTTIEAEEGQADHHDVVQHQMQAPRLHFPLKFLVKGTQVQLVQHVH
 PVQRCEHCGRLYKHKHECSARRRHFYFHHINSHSSNWWQEIQFFPIGSHPRTERLFLT
 YDVETYTWMGSFGKQLVPFMLVMKLSGDDRLVELALDLALQLKWDRWHGDPRTFYCVT
 PEKMAVGQQFRQYRDRLQTALAVDLWTSFLRANPHLADWALEQHGLSDPDELTYEELK
 KLPHVKGRPRFVELYIVGHNINGFDEIVLAAQVINNRAEVPQPFRITRNFMPRAGKIL
 FNDVTFALPNPAYKKRTDFQLWEQGGCDDIDFKHQFLKVMVRDTFALTHTSLRKAAQA
 YALPVEKGCCAYKAVNQFYMLGSYRADQDGFPLEEYWKDREEFLLNRELWKQKGQLKY
 DIIQETLDYCALDVLVTAELVAKLQDSYAHFIRDSVGLPHAHFNIFQRPTISSNSHAI
 FRQIVYRAEKPSRANLGAGLLAPSHELYDYVRASIRGGRCYPTYIGILDEPLYVYDIC
 GMYASALTHPMPWGTPLSPYERALAVREWQASLDDLGTCISYFDPDLLPGIFTIDADP
 PDELMLDPLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWQVRIVPDELTTVF
 PEWKCVAREYVQLNIAAKERADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQ
 MDEGLLKGISAGTVNIKSSSFLETDNLSAEVMPAFEREYLPQQLALLDSDPEDSEDEQ
 RPAPFYTPPAGTPGHVAYTYKPITFLDVDEGDMCLHTLEKVDPLVDNDRYPSHVASFV
  LAWTRAFVSEWSGFLYDEDRGVPLEDRPIKSVYGDTDSLFVTQRGHELMETRGKKRIK
 KNGGKLVFDPNQPDLTWLVECETVCAHCGADAYAPESVFLAPKLYALKSLLCPACGQT
 SKGKLRAKGHAAEALNYELMVNCYLADAQGADRERFSTSRMSLKRTLASAQPGAHPFT
 VTETTLTRTLRPWKDRTLAALDAHRLAPYSRSRPNPRNEEVCWIEMP"
 gene <13..>14
 /gene="IVa2"
 mRNA 1..1347
 /gene="IVa2"
 /product="IVa2"
 /inference="non-experimental evidence, no additional
 details recorded"
 CDS 1..1347
 /gene="IVa2"
 /inference="non-experimental evidence, no additional
 details recorded"
 /codon_start=1
 /product="IVa2"
 /protein_id="AAS66915.1"
 /db_xref="GI:45504795"
 /translation="METRGRRSGAVLDQPDEPEAHPRKRPARRAPLYRDGDHPDADAA
 TLEGPDPGRAGRPSSGALLPQSPQPAKRGGLLDRDAVEHITELWDRLELLQQTLSKMP
 MADGLKPLKNFASLQELLSLGGERLLAELVRENMHVRQMMNEVAPLLREDGSCVSLNY
 HLQPVIGVIYGPTGCGKSQLLRNLLSAQLISPAPETVFFIAPQVDMIPPSELKAWEMQ
 ICEGNYAPGIEGTFVPQSGTLRPKFIKMAYEDLTQDHNYDVSDPRNVFAQAAAHGPIA
 IIMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIAN
 LKIQAKMHLISPRMHPSQLNRFVNTYTKGLPVAISLLLKDIVQHHALRPCYDWVIYNT
 TPEHEALQWSYLHPRDGLMPMYLNIQSHLYRVLEKIHRVLNDRGRWSRAYRARKIK"
 polyA_signal <1343..1347
 /inference="non-experimental evidence, no additional
 details recorded"
  /note="E2B/IVa2"
ORIGIN 
 1 atggagacca gagggcgccg atcgggagcg gttctcgacc agccggatga gcctgaagcg
 61 caccctcgca agcgcccagc ccggcgcgca cccctttacc gtgacggaga ccaccctgac
 121 gcggacgctg cgaccctgga aggaccggac cctggccgcg ctggacgccc atcgtctggc
 181 gccctactcc cgcagtcgcc ccaacccgcg aaacgaggag gtctgctgga tcgagatgcc
 241 gtagagcaca tcaccgagct ctgggaccgc ttggaactcc tgcaacagac cctttccaaa
 301 atgcccatgg ccgacgggct caagccgctg aaaaacttcg cctcgctcca ggagctcctc
 361 tcgctgggcg gagagcgact cctggcggaa ctggtgcgcg agaacatgca cgtgcgccaa
 421 atgatgaacg aggtggcccc ccttcttagg gaggacggca gctgtgtctc cctcaactac
 481 cacctgcagc cggtcattgg ggttatctac ggccccaccg gctgcggtaa gtcccagcta
 541 ctccgcaacc tgctttccgc ccagctcatc tcccccgccc cggaaaccgt tttctttatc
 601 gccccgcagg tggacatgat ccccccctcg gagcttaagg cctgggagat gcagatctgt
 661 gagggaaact acgcccccgg gattgagggt accttcgtcc cccaatcggg caccctccgc
 721 cccaaattca ttaaaatggc ctatgaagat ctcacccagg accacaacta cgatgtgtcc
  781 gacccccgaa acgtctttgc ccaagccgcc gcccacgggc ccatagccat tatcatggat
 841 gagtgcatgg aaaacctggg cggccacaag ggcgtctcca aattctttca tgccttccct
 901 tccaagttgc atgacaaatt ccccaagtgc accggataca ccgtgctggt ggtcctgcac
 961 aacatgaatc ccaggcggga tctgggcggt aacatcgcca atctgaagat ccaggctaag
 1021 atgcacctca tctccccccg catgcatccc tcccagctca acaggtttgt aaacacctac
 1081 accaaagggc tgcccgtggc catcagtctc ctcctcaaag atattgtgca acaccacgcc
 1141 ctgcgtccct gctatgactg ggtgatttac aacaccaccc ccgagcacga ggccctgcaa
 1201 tggagctacc ttcacccccg ggacgggctc atgcccatgt acctcaatat ccaatcccac
 1261 ctctaccggg tcttggaaaa gatccaccgg gtgctcaatg atcgaggccg gtggtccagg
 1321 gcctaccgtg cgcgaaaaat caaataa
//