LOCUS AY487947 1929 bp DNA linear VRL 20-OCT-2004
DEFINITION Human adenovirus E, complete genome.
ACCESSION AY487947 REGION: complement(join(8404..10323,13765..13773))
VERSION AY487947.1 GI:45504790
KEYWORDS .
SOURCE Human adenovirus E (HAdV-E)
ORGANISM Human adenovirus E
Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 1929)
AUTHORS Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
Wilkinson,G.W.G.
TITLE Characterization and manipulation of the human adenovirus 4 genome
JOURNAL J. Gen. Virol. 85 (11), 3361-3366 (2004)
PUBMED 15483252
REFERENCE 2 (bases 1 to 1929)
AUTHORS Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
Wilkinson,G.W.G.
TITLE Direct Submission
JOURNAL Submitted (26-NOV-2003) University of Wales College of Medicine,
Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
U.K.
REFERENCE 3 (bases 1 to 1929)
AUTHORS Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
Wilkinson,G.W.G.
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2004) University of Wales College of Medicine,
Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
U.K.
FEATURES Location/Qualifiers
source 1..1929
/organism="Human adenovirus E"
/mol_type="genomic DNA"
/strain="vaccine (CL 68578)"
/serotype="human adenovirus 4"
/db_xref="taxon:130308"
/note="acronym: HAdV-4; acronym: HAdV-E"
gene complement(<9..>10)
/gene="L5"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L5"
/product="L5 fiber"
/inference="non-experimental evidence, no additional
details recorded"
gene complement(<9..>10)
/gene="L4"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L4"
/product="L4 100K"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L4"
/product="L4 22K"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L4"
/product="L4 33K"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L4"
/product="L4 pVIII"
/inference="non-experimental evidence, no additional
details recorded"
gene <9..>10
/gene="E2B"
/inference="non-experimental evidence, no additional
details recorded"
mRNA join(<1..9,1728..1929)
/gene="E2B"
/product="pol"
/inference="non-experimental evidence, no additional
details recorded"
mRNA <1..1929
/gene="E2B"
/product="pTP"
/inference="non-experimental evidence, no additional
details recorded"
gene complement(<9..>10)
/gene="L3"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L3"
/product="L3 pVI"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L3"
/product="L3 hexon"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L3"
/product="L3 protease"
/inference="non-experimental evidence, no additional
details recorded"
gene complement(<9..>10)
/gene="L2"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L2"
/product="L2 III"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L2"
/product="L2 pVII"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L2"
/product="L2 V"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L2"
/product="L2 pX"
/inference="non-experimental evidence, no additional
details recorded"
CDS join(1..9,1728..1929)
/gene="E2B"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/product="pol"
/protein_id="AAS66917.1"
/db_xref="GI:45504797"
/translation="MALVQTHGSRGLHPEASDPGRQPSRRRSRQSSPGAVPEPARARR
RRAPATTASGSRAAPTARRASSPPLLTMEAKPLPPAKKKRGTVVTPQGHGTLQAIDVA
TNGAVEIKYHLDLPRALEKLLQVNRAPPLPTDLTPQRLRTLDSSGLRALVLALRPVRA
EVWTCLPRGLVSMTTIEAEEGQADHHDVVQHQMQAPRLHFPLKFLVKGTQVQLVQHVH
PVQRCEHCGRLYKHKHECSARRRHFYFHHINSHSSNWWQEIQFFPIGSHPRTERLFLT
YDVETYTWMGSFGKQLVPFMLVMKLSGDDRLVELALDLALQLKWDRWHGDPRTFYCVT
PEKMAVGQQFRQYRDRLQTALAVDLWTSFLRANPHLADWALEQHGLSDPDELTYEELK
KLPHVKGRPRFVELYIVGHNINGFDEIVLAAQVINNRAEVPQPFRITRNFMPRAGKIL
FNDVTFALPNPAYKKRTDFQLWEQGGCDDIDFKHQFLKVMVRDTFALTHTSLRKAAQA
YALPVEKGCCAYKAVNQFYMLGSYRADQDGFPLEEYWKDREEFLLNRELWKQKGQLKY
DIIQETLDYCALDVLVTAELVAKLQDSYAHFIRDSVGLPHAHFNIFQRPTISSNSHAI
FRQIVYRAEKPSRANLGAGLLAPSHELYDYVRASIRGGRCYPTYIGILDEPLYVYDIC
GMYASALTHPMPWGTPLSPYERALAVREWQASLDDLGTCISYFDPDLLPGIFTIDADP
PDELMLDPLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWQVRIVPDELTTVF
PEWKCVAREYVQLNIAAKERADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQ
MDEGLLKGISAGTVNIKSSSFLETDNLSAEVMPAFEREYLPQQLALLDSDPEDSEDEQ
RPAPFYTPPAGTPGHVAYTYKPITFLDVDEGDMCLHTLEKVDPLVDNDRYPSHVASFV
LAWTRAFVSEWSGFLYDEDRGVPLEDRPIKSVYGDTDSLFVTQRGHELMETRGKKRIK
KNGGKLVFDPNQPDLTWLVECETVCAHCGADAYAPESVFLAPKLYALKSLLCPACGQT
SKGKLRAKGHAAEALNYELMVNCYLADAQGADRERFSTSRMSLKRTLASAQPGAHPFT
VTETTLTRTLRPWKDRTLAALDAHRLAPYSRSRPNPRNEEVCWIEMP"
CDS 1..1929
/gene="E2B"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/product="pTP"
/protein_id="AAS66918.1"
/db_xref="GI:45504798"
/translation="MALSINDCARLTGQTVPTMNYFLPLRNIWNRVREFPRASTTAAG
ITWMSRYIYGYHRTMLEDLAPGAPATERWPLYRQPPPHFLIGYQYLVRTCNDYIFDSR
AYSRLKYHELARPGHQTVNWSVMANCSYTINTGAYHRFVDFDDFQTTLTQIQQAILAE
RVVADLALVQPQRGFGLTRMHGRAGEEEVPVERLMQDYYKDLARCQDHAWGMADRLRI
QQAGPKDLVLLATIRRLRTAYFNFITSSIAPAHTPPPPEETVLSLPCDCDWLEAFVQR
FSDPVDLETLRSLRGVPTGQLIRCIVSALSLPNGDPPGHLEMRGGVFTLRPREDGRAV
TETMRRRRGETIERFIDRLPVRRRRRRPPPPPPPPEEEVEEMLVDEEEEVEELPGAFE
REVRATIAELIRLLEEDLTVSARNSQFFNFAVDFYEAMERLEALGDVSEMPLRRWIMY
FFVTEHIATTLNYLYQRLCNYAVFARHVELNLAQVVMRARDPEGAVVYSRVWNEAGMN
AFSQLMGRISNDLAATVERAGRGDLQEEEIEQFMTEIAYQDNSGDVQEILRQAAVNDT
EIDSVELSFRFKLTGPVAFTQRRQIQDVNRRVVAHASLLRAQYQNLPARGADVPLPPL
PPGPEPPLPPGARPRRRF"
gene complement(<10..>1929)
/gene="L1"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L1"
/product="L1 52K"
/inference="non-experimental evidence, no additional
details recorded"
mRNA complement(791..877)
/gene="L1"
/product="L1 pIIIa"
/inference="non-experimental evidence, no additional
details recorded"
ORIGIN
1 atggccttga gcatcaacga ctgcgcgcgc ctcacgggcc agaccgtgcc caccatgaac
61 tacttcctgc cgctgcgcaa catctggaac cgcgtccgcg agttccctcg cgcctccacc
121 accgccgccg gcatcacctg gatgtcaagg tacatctacg gctaccaccg caccatgctc
181 gaggacctag cgcccggcgc ccccgccacc gagcgatggc cgctctaccg ccagccgccg
241 ccgcacttcc tcatcggcta ccagtacctg gtgcgcacct gcaacgacta catcttcgac
301 tcgcgcgcct actcgcgcct caagtaccac gagctcgcgc ggcccggtca ccagactgtc
361 aactggtccg tcatggccaa ctgctcctac accattaaca ccggagccta ccaccgcttc
421 gtcgactttg acgacttcca gaccaccctc acccagatcc agcaggccat cctcgccgag
481 cgcgtcgtcg ctgacctggc gctcgtccag ccgcagcgcg ggtttgggct cacgcgtatg
541 cacggccgcg cgggcgagga ggaggtgccc gtggagcggc tcatgcagga ctactacaag
601 gacctggcca ggtgtcagga ccacgcctgg ggcatggccg accgtctgcg catccagcaa
661 gccgggccca aagacctggt gctcctcgcc accatccgcc gtctcagaac cgcctatttc
721 aacttcatca ccagcagcat cgcccccgcc cacaccccac cgccgccaga agaaaccgtg
781 ctcagcctac cttgcgactg cgactggctc gaagccttcg ttcaacggtt ttcagatccc
841 gtggatctag agacgcttag gtccttgcgc ggagtcccta cggggcaatt gataagatgc
901 atcgtcagcg cactctccct gcccaacggg gaccccccgg gccacctgga gatgcgcggc
961 ggcgtcttta cgctgcgacc ccgcgaggac gggcgcgccg tcaccgagac catgcgacgc
1021 cggcgcggcg agaccatcga gcgtttcatc gaccgtctgc ccgtgcgccg ccggcgacgc
1081 aggccccctc ccccgccacc accgcctgag gaggaagtag aagagatgtt agtggatgaa
1141 gaggaggaag tggaggaact cccgggagcc ttcgagcgcg aggtgcgcgc caccatcgcc
1201 gagctcatcc gtcttctgga ggaggacttg accgtatctg cacgcaactc ccagtttttc
1261 aacttcgccg tggactttta cgaggccatg gagcgcttgg aagccctggg cgacgtcagc
1321 gaaatgccgc tccgccgctg gattatgtac ttctttgtca ctgagcacat tgccaccacg
1381 ctcaactacc tctaccagcg cctctgcaac tacgcggttt ttgcgcgcca cgtggagctc
1441 aacctcgccc aggtggtcat gcgcgcccgc gatcccgagg gcgccgtggt ttacagccgc
1501 gtctggaacg aggcgggcat gaacgccttc tcgcagctca tgggccgcat ctccaacgac
1561 ctcgcggcca ccgtggagcg cgccggccgc ggagaccttc aggaggagga gatcgagcag
1621 ttcatgaccg agattgccta ccaggacaac tcgggcgacg tgcaagagat tctgcggcag
1681 gccgccgtca atgataccga gattgattct gtcgaactgt ctttcaggtt caaactcacg
1741 ggtcccgtgg ccttcaccca gaggcgtcag atccaggacg tcaaccgtcg cgtcgtcgct
1801 cacgccagtc ttctccgggc gcagtaccag aacctgcccg cgcgcggcgc cgacgtgccc
1861 ctgccaccac tgcctccggg tcccgagccg cccctaccgc ccggcgcgcg tcctcgccgc
1921 cgcttttaa
//