LOCUS       AY487947                1929 bp    DNA     linear   VRL 20-OCT-2004
DEFINITION  Human adenovirus E, complete genome.
ACCESSION   AY487947 REGION: complement(join(8404..10323,13765..13773))
VERSION     AY487947.1  GI:45504790
KEYWORDS    .
SOURCE      Human adenovirus E (HAdV-E)
  ORGANISM  Human adenovirus E
            Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
            Wilkinson,G.W.G.
  TITLE     Characterization and manipulation of the human adenovirus 4 genome
  JOURNAL   J. Gen. Virol. 85 (11), 3361-3366 (2004)
   PUBMED   15483252
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
            Wilkinson,G.W.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2003) University of Wales College of Medicine,
            Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
            U.K.
REFERENCE   3  (bases 1 to 1929)
  AUTHORS   Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
            Wilkinson,G.W.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUN-2004) University of Wales College of Medicine,
            Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
            U.K.
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Human adenovirus E"
                     /mol_type="genomic DNA"
                     /strain="vaccine (CL 68578)"
                     /serotype="human adenovirus 4"
                     /db_xref="taxon:130308"
                     /note="acronym: HAdV-4; acronym: HAdV-E"
     gene            complement(<9..>10)
                     /gene="L5"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L5"
                     /product="L5 fiber"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            complement(<9..>10)
                     /gene="L4"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L4"
                     /product="L4 100K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L4"
                     /product="L4 22K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L4"
                     /product="L4 33K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L4"
                     /product="L4 pVIII"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            <9..>10
                     /gene="E2B"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            join(<1..9,1728..1929)
                     /gene="E2B"
                     /product="pol"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            <1..1929
                     /gene="E2B"
                     /product="pTP"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            complement(<9..>10)
                     /gene="L3"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L3"
                     /product="L3 pVI"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L3"
                     /product="L3 hexon"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L3"
                     /product="L3 protease"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            complement(<9..>10)
                     /gene="L2"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L2"
                     /product="L2 III"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L2"
                     /product="L2 pVII"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L2"
                     /product="L2 V"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L2"
                     /product="L2 pX"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     CDS             join(1..9,1728..1929)
                     /gene="E2B"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /codon_start=1
                     /product="pol"
                     /protein_id="AAS66917.1"
                     /db_xref="GI:45504797"
                     /translation="MALVQTHGSRGLHPEASDPGRQPSRRRSRQSSPGAVPEPARARR
                     RRAPATTASGSRAAPTARRASSPPLLTMEAKPLPPAKKKRGTVVTPQGHGTLQAIDVA
                     TNGAVEIKYHLDLPRALEKLLQVNRAPPLPTDLTPQRLRTLDSSGLRALVLALRPVRA
                     EVWTCLPRGLVSMTTIEAEEGQADHHDVVQHQMQAPRLHFPLKFLVKGTQVQLVQHVH
                     PVQRCEHCGRLYKHKHECSARRRHFYFHHINSHSSNWWQEIQFFPIGSHPRTERLFLT
                     YDVETYTWMGSFGKQLVPFMLVMKLSGDDRLVELALDLALQLKWDRWHGDPRTFYCVT
                     PEKMAVGQQFRQYRDRLQTALAVDLWTSFLRANPHLADWALEQHGLSDPDELTYEELK
                     KLPHVKGRPRFVELYIVGHNINGFDEIVLAAQVINNRAEVPQPFRITRNFMPRAGKIL
                     FNDVTFALPNPAYKKRTDFQLWEQGGCDDIDFKHQFLKVMVRDTFALTHTSLRKAAQA
                     YALPVEKGCCAYKAVNQFYMLGSYRADQDGFPLEEYWKDREEFLLNRELWKQKGQLKY
                     DIIQETLDYCALDVLVTAELVAKLQDSYAHFIRDSVGLPHAHFNIFQRPTISSNSHAI
                     FRQIVYRAEKPSRANLGAGLLAPSHELYDYVRASIRGGRCYPTYIGILDEPLYVYDIC
                     GMYASALTHPMPWGTPLSPYERALAVREWQASLDDLGTCISYFDPDLLPGIFTIDADP
                     PDELMLDPLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWQVRIVPDELTTVF
                     PEWKCVAREYVQLNIAAKERADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQ
                     MDEGLLKGISAGTVNIKSSSFLETDNLSAEVMPAFEREYLPQQLALLDSDPEDSEDEQ
                     RPAPFYTPPAGTPGHVAYTYKPITFLDVDEGDMCLHTLEKVDPLVDNDRYPSHVASFV
                     LAWTRAFVSEWSGFLYDEDRGVPLEDRPIKSVYGDTDSLFVTQRGHELMETRGKKRIK
                     KNGGKLVFDPNQPDLTWLVECETVCAHCGADAYAPESVFLAPKLYALKSLLCPACGQT
                     SKGKLRAKGHAAEALNYELMVNCYLADAQGADRERFSTSRMSLKRTLASAQPGAHPFT
                     VTETTLTRTLRPWKDRTLAALDAHRLAPYSRSRPNPRNEEVCWIEMP"
     CDS             1..1929
                     /gene="E2B"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /codon_start=1
                     /product="pTP"
                     /protein_id="AAS66918.1"
                     /db_xref="GI:45504798"
                     /translation="MALSINDCARLTGQTVPTMNYFLPLRNIWNRVREFPRASTTAAG
                     ITWMSRYIYGYHRTMLEDLAPGAPATERWPLYRQPPPHFLIGYQYLVRTCNDYIFDSR
                     AYSRLKYHELARPGHQTVNWSVMANCSYTINTGAYHRFVDFDDFQTTLTQIQQAILAE
                     RVVADLALVQPQRGFGLTRMHGRAGEEEVPVERLMQDYYKDLARCQDHAWGMADRLRI
                     QQAGPKDLVLLATIRRLRTAYFNFITSSIAPAHTPPPPEETVLSLPCDCDWLEAFVQR
                     FSDPVDLETLRSLRGVPTGQLIRCIVSALSLPNGDPPGHLEMRGGVFTLRPREDGRAV
                     TETMRRRRGETIERFIDRLPVRRRRRRPPPPPPPPEEEVEEMLVDEEEEVEELPGAFE
                     REVRATIAELIRLLEEDLTVSARNSQFFNFAVDFYEAMERLEALGDVSEMPLRRWIMY
                     FFVTEHIATTLNYLYQRLCNYAVFARHVELNLAQVVMRARDPEGAVVYSRVWNEAGMN
                     AFSQLMGRISNDLAATVERAGRGDLQEEEIEQFMTEIAYQDNSGDVQEILRQAAVNDT
                     EIDSVELSFRFKLTGPVAFTQRRQIQDVNRRVVAHASLLRAQYQNLPARGADVPLPPL
                     PPGPEPPLPPGARPRRRF"
     gene            complement(<10..>1929)
                     /gene="L1"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L1"
                     /product="L1 52K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(791..877)
                     /gene="L1"
                     /product="L1 pIIIa"
                     /inference="non-experimental evidence, no additional
                     details recorded"
ORIGIN      
        1 atggccttga gcatcaacga ctgcgcgcgc ctcacgggcc agaccgtgcc caccatgaac
       61 tacttcctgc cgctgcgcaa catctggaac cgcgtccgcg agttccctcg cgcctccacc
      121 accgccgccg gcatcacctg gatgtcaagg tacatctacg gctaccaccg caccatgctc
      181 gaggacctag cgcccggcgc ccccgccacc gagcgatggc cgctctaccg ccagccgccg
      241 ccgcacttcc tcatcggcta ccagtacctg gtgcgcacct gcaacgacta catcttcgac
      301 tcgcgcgcct actcgcgcct caagtaccac gagctcgcgc ggcccggtca ccagactgtc
      361 aactggtccg tcatggccaa ctgctcctac accattaaca ccggagccta ccaccgcttc
      421 gtcgactttg acgacttcca gaccaccctc acccagatcc agcaggccat cctcgccgag
      481 cgcgtcgtcg ctgacctggc gctcgtccag ccgcagcgcg ggtttgggct cacgcgtatg
      541 cacggccgcg cgggcgagga ggaggtgccc gtggagcggc tcatgcagga ctactacaag
      601 gacctggcca ggtgtcagga ccacgcctgg ggcatggccg accgtctgcg catccagcaa
      661 gccgggccca aagacctggt gctcctcgcc accatccgcc gtctcagaac cgcctatttc
      721 aacttcatca ccagcagcat cgcccccgcc cacaccccac cgccgccaga agaaaccgtg
      781 ctcagcctac cttgcgactg cgactggctc gaagccttcg ttcaacggtt ttcagatccc
      841 gtggatctag agacgcttag gtccttgcgc ggagtcccta cggggcaatt gataagatgc
      901 atcgtcagcg cactctccct gcccaacggg gaccccccgg gccacctgga gatgcgcggc
      961 ggcgtcttta cgctgcgacc ccgcgaggac gggcgcgccg tcaccgagac catgcgacgc
     1021 cggcgcggcg agaccatcga gcgtttcatc gaccgtctgc ccgtgcgccg ccggcgacgc
     1081 aggccccctc ccccgccacc accgcctgag gaggaagtag aagagatgtt agtggatgaa
     1141 gaggaggaag tggaggaact cccgggagcc ttcgagcgcg aggtgcgcgc caccatcgcc
     1201 gagctcatcc gtcttctgga ggaggacttg accgtatctg cacgcaactc ccagtttttc
     1261 aacttcgccg tggactttta cgaggccatg gagcgcttgg aagccctggg cgacgtcagc
     1321 gaaatgccgc tccgccgctg gattatgtac ttctttgtca ctgagcacat tgccaccacg
     1381 ctcaactacc tctaccagcg cctctgcaac tacgcggttt ttgcgcgcca cgtggagctc
     1441 aacctcgccc aggtggtcat gcgcgcccgc gatcccgagg gcgccgtggt ttacagccgc
     1501 gtctggaacg aggcgggcat gaacgccttc tcgcagctca tgggccgcat ctccaacgac
     1561 ctcgcggcca ccgtggagcg cgccggccgc ggagaccttc aggaggagga gatcgagcag
     1621 ttcatgaccg agattgccta ccaggacaac tcgggcgacg tgcaagagat tctgcggcag
     1681 gccgccgtca atgataccga gattgattct gtcgaactgt ctttcaggtt caaactcacg
     1741 ggtcccgtgg ccttcaccca gaggcgtcag atccaggacg tcaaccgtcg cgtcgtcgct
     1801 cacgccagtc ttctccgggc gcagtaccag aacctgcccg cgcgcggcgc cgacgtgccc
     1861 ctgccaccac tgcctccggg tcccgagccg cccctaccgc ccggcgcgcg tcctcgccgc
     1921 cgcttttaa
//