LOCUS       AY487947                3582 bp    DNA     linear   VRL 20-OCT-2004
DEFINITION  Human adenovirus E, complete genome.
ACCESSION   AY487947 REGION: complement(join(5033..8605,13765..13773))
VERSION     AY487947.1  GI:45504790
KEYWORDS    .
SOURCE      Human adenovirus E (HAdV-E)
  ORGANISM  Human adenovirus E
            Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
            Wilkinson,G.W.G.
  TITLE     Characterization and manipulation of the human adenovirus 4 genome
  JOURNAL   J. Gen. Virol. 85 (11), 3361-3366 (2004)
   PUBMED   15483252
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
            Wilkinson,G.W.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2003) University of Wales College of Medicine,
            Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
            U.K.
REFERENCE   3  (bases 1 to 3582)
  AUTHORS   Jacobs,S.C., Davison,A.J., Carr,S., Bennett,A.M., Phillpotts,R. and
            Wilkinson,G.W.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUN-2004) University of Wales College of Medicine,
            Department of Medicine, Tenovus Building, Cardiff, Wales CF4 4XX,
            U.K.
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Human adenovirus E"
                     /mol_type="genomic DNA"
                     /strain="vaccine (CL 68578)"
                     /serotype="human adenovirus 4"
                     /db_xref="taxon:130308"
                     /note="acronym: HAdV-4; acronym: HAdV-E"
     gene            complement(<9..>10)
                     /gene="L5"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L5"
                     /product="L5 fiber"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            complement(<9..>10)
                     /gene="L4"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L4"
                     /product="L4 100K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L4"
                     /product="L4 22K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L4"
                     /product="L4 33K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L4"
                     /product="L4 pVIII"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            <9..>10
                     /gene="E2B"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            <1..3582
                     /gene="E2B"
                     /product="pol"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            <1..>3582
                     /gene="E2B"
                     /product="pTP"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            complement(<9..>10)
                     /gene="L3"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L3"
                     /product="L3 pVI"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L3"
                     /product="L3 hexon"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L3"
                     /product="L3 protease"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     gene            complement(<9..>10)
                     /gene="L2"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L2"
                     /product="L2 III"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L2"
                     /product="L2 pVII"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L2"
                     /product="L2 V"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L2"
                     /product="L2 pX"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     CDS             1..3582
                     /gene="E2B"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /codon_start=1
                     /product="pol"
                     /protein_id="AAS66917.1"
                     /db_xref="GI:45504797"
                     /translation="MALVQTHGSRGLHPEASDPGRQPSRRRSRQSSPGAVPEPARARR
                     RRAPATTASGSRAAPTARRASSPPLLTMEAKPLPPAKKKRGTVVTPQGHGTLQAIDVA
                     TNGAVEIKYHLDLPRALEKLLQVNRAPPLPTDLTPQRLRTLDSSGLRALVLALRPVRA
                     EVWTCLPRGLVSMTTIEAEEGQADHHDVVQHQMQAPRLHFPLKFLVKGTQVQLVQHVH
                     PVQRCEHCGRLYKHKHECSARRRHFYFHHINSHSSNWWQEIQFFPIGSHPRTERLFLT
                     YDVETYTWMGSFGKQLVPFMLVMKLSGDDRLVELALDLALQLKWDRWHGDPRTFYCVT
                     PEKMAVGQQFRQYRDRLQTALAVDLWTSFLRANPHLADWALEQHGLSDPDELTYEELK
                     KLPHVKGRPRFVELYIVGHNINGFDEIVLAAQVINNRAEVPQPFRITRNFMPRAGKIL
                     FNDVTFALPNPAYKKRTDFQLWEQGGCDDIDFKHQFLKVMVRDTFALTHTSLRKAAQA
                     YALPVEKGCCAYKAVNQFYMLGSYRADQDGFPLEEYWKDREEFLLNRELWKQKGQLKY
                     DIIQETLDYCALDVLVTAELVAKLQDSYAHFIRDSVGLPHAHFNIFQRPTISSNSHAI
                     FRQIVYRAEKPSRANLGAGLLAPSHELYDYVRASIRGGRCYPTYIGILDEPLYVYDIC
                     GMYASALTHPMPWGTPLSPYERALAVREWQASLDDLGTCISYFDPDLLPGIFTIDADP
                     PDELMLDPLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWQVRIVPDELTTVF
                     PEWKCVAREYVQLNIAAKERADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQ
                     MDEGLLKGISAGTVNIKSSSFLETDNLSAEVMPAFEREYLPQQLALLDSDPEDSEDEQ
                     RPAPFYTPPAGTPGHVAYTYKPITFLDVDEGDMCLHTLEKVDPLVDNDRYPSHVASFV
                     LAWTRAFVSEWSGFLYDEDRGVPLEDRPIKSVYGDTDSLFVTQRGHELMETRGKKRIK
                     KNGGKLVFDPNQPDLTWLVECETVCAHCGADAYAPESVFLAPKLYALKSLLCPACGQT
                     SKGKLRAKGHAAEALNYELMVNCYLADAQGADRERFSTSRMSLKRTLASAQPGAHPFT
                     VTETTLTRTLRPWKDRTLAALDAHRLAPYSRSRPNPRNEEVCWIEMP"
     CDS             1..>211
                     /gene="E2B"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /codon_start=1
                     /product="pTP"
                     /protein_id="AAS66918.1"
                     /db_xref="GI:45504798"
                     /translation="MALSINDCARLTGQTVPTMNYFLPLRNIWNRVREFPRASTTAAG
                     ITWMSRYIYGYHRTMLEDLAPGAPATERWPLYRQPPPHFLIGYQYLVRTCNDYIFDSR
                     AYSRLKYHELARPGHQTVNWSVMANCSYTINTGAYHRFVDFDDFQTTLTQIQQAILAE
                     RVVADLALVQPQRGFGLTRMHGRAGEEEVPVERLMQDYYKDLARCQDHAWGMADRLRI
                     QQAGPKDLVLLATIRRLRTAYFNFITSSIAPAHTPPPPEETVLSLPCDCDWLEAFVQR
                     FSDPVDLETLRSLRGVPTGQLIRCIVSALSLPNGDPPGHLEMRGGVFTLRPREDGRAV
                     TETMRRRRGETIERFIDRLPVRRRRRRPPPPPPPPEEEVEEMLVDEEEEVEELPGAFE
                     REVRATIAELIRLLEEDLTVSARNSQFFNFAVDFYEAMERLEALGDVSEMPLRRWIMY
                     FFVTEHIATTLNYLYQRLCNYAVFARHVELNLAQVVMRARDPEGAVVYSRVWNEAGMN
                     AFSQLMGRISNDLAATVERAGRGDLQEEEIEQFMTEIAYQDNSGDVQEILRQAAVNDT
                     EIDSVELSFRFKLTGPVAFTQRRQIQDVNRRVVAHASLLRAQYQNLPARGADVPLPPL
                     PPGPEPPLPPGARPRRRF"
     gene            complement(10..>2761)
                     /gene="L1"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L1"
                     /product="L1 52K"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     mRNA            complement(join(1597..1668,2690..2730))
                     /gene="L1"
                     /product="L1 pIIIa"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     TATA_signal     complement(2755..2761)
                     /note="L"
     gene            <2943..3582
                     /gene="IVa2"
     mRNA            join(2943..3073,3352..3582)
                     /gene="IVa2"
                     /product="IVa2"
                     /inference="non-experimental evidence, no additional
                     details recorded"
     CDS             join(3061..3073,3352..3582)
                     /gene="IVa2"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /codon_start=1
                     /product="IVa2"
                     /protein_id="AAS66915.1"
                     /db_xref="GI:45504795"
                     /translation="METRGRRSGAVLDQPDEPEAHPRKRPARRAPLYRDGDHPDADAA
                     TLEGPDPGRAGRPSSGALLPQSPQPAKRGGLLDRDAVEHITELWDRLELLQQTLSKMP
                     MADGLKPLKNFASLQELLSLGGERLLAELVRENMHVRQMMNEVAPLLREDGSCVSLNY
                     HLQPVIGVIYGPTGCGKSQLLRNLLSAQLISPAPETVFFIAPQVDMIPPSELKAWEMQ
                     ICEGNYAPGIEGTFVPQSGTLRPKFIKMAYEDLTQDHNYDVSDPRNVFAQAAAHGPIA
                     IIMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIAN
                     LKIQAKMHLISPRMHPSQLNRFVNTYTKGLPVAISLLLKDIVQHHALRPCYDWVIYNT
                     TPEHEALQWSYLHPRDGLMPMYLNIQSHLYRVLEKIHRVLNDRGRWSRAYRARKIK"
ORIGIN      
        1 atggccttgg ttcaaactca cgggtcccgt ggccttcacc cagaggcgtc agatccagga
       61 cgtcaaccgt cgcgtcgtcg ctcacgccag tcttctccgg gcgcagtacc agaacctgcc
      121 cgcgcgcggc gccgacgtgc ccctgccacc actgcctccg ggtcccgagc cgcccctacc
      181 gcccggcgcg cgtcctcgcc gccgctttta accatggaag ccaaaccgct tccgcccgcc
      241 aagaagaaac gggggacggt ggtcactccc caggggcacg ggacactgca agccatcgac
      301 gtcgccacca acggcgcggt ggagatcaag taccatctgg acctcccgcg cgcccttgaa
      361 aaactcctgc aagtcaaccg cgcgccgccg ctgcccactg acctgactcc gcagcgtctc
      421 aggaccctgg acagctccgg cctgcgcgcc ctcgtcctcg ctctccgacc cgttcgcgcc
      481 gaggtctgga cctgcctccc gcgcgggctc gtcagcatga ccaccatcga ggcagaagag
      541 ggccaggccg accaccacga cgtagtacag caccagatgc aggcgccacg actccacttc
      601 ccactgaaat tcctcgtcaa aggaacccag gtacagctcg tgcagcacgt gcatcccgtg
      661 cagcgttgcg agcactgtgg ccgcttgtat aaacacaagc acgaatgttc ggcgcgccgt
      721 cggcatttct acttccatca catcaacagc cattcctcca actggtggca ggagatccag
      781 ttcttcccca tcggctcgca tcctcgcacc gaaaggctct tcctcaccta cgatgtggaa
      841 acctacacct ggatggggtc cttcggcaag cagctcgtcc ccttcatgct ggtcatgaaa
      901 ctctccgggg acgaccggct cgttgagctc gcccttgatc tcgccctcca gctaaaatgg
      961 gaccgttggc acggcgaccc ccgcaccttc tactgcgtca cccccgaaaa aatggccgtg
     1021 ggtcagcagt tccgccagta ccgggatcgt ctgcaaaccg ccctggccgt ggatctctgg
     1081 acttccttcc tccgcgccaa cccccatctc gccgactggg ccctcgagca gcacgggctc
     1141 agcgaccccg acgagctcac ctacgaggag ctcaagaaac tgccccacgt caagggccgc
     1201 ccgcggttcg tggaactata cattgtgggc cacaacatta acggcttcga cgagatcgtg
     1261 ctcgccgccc aggtcatcaa caaccgggcc gaggtgcccc agcctttccg catcactcgc
     1321 aactttatgc cccgcgcggg caagatcctc ttcaacgatg ttactttcgc tttgcccaac
     1381 cccgcctaca agaagcgcac ggacttccag ctctgggagc aggggggctg cgacgatatc
     1441 gacttcaagc accagttcct aaaggtcatg gtcagggaca ccttcgccct cacgcacacc
     1501 tccctgcgca aggccgccca ggcctatgcc ctccccgtgg agaagggctg ctgcgcctac
     1561 aaggccgtta accagttcta catgctaggc tcttaccgtg ccgaccagga cgggttcccc
     1621 cttgaagagt actggaagga ccgcgaagag ttccttctca accgcgagct gtggaaacaa
     1681 aagggccagc tcaagtatga catcatccaa gagacccttg actactgcgc cctggacgtc
     1741 ctcgtcaccg ccgagcttgt cgccaagctg caagactcct acgcccactt catccgcgac
     1801 tcggtcggcc tgccccacgc ccacttcaac atcttccaaa gacccaccat ctcctccaac
     1861 tcccacgcca tcttccgtca gatcgtctac cgcgccgaaa aacccagccg cgccaatctc
     1921 ggagccgggc tcctcgcccc ctcgcacgag ttgtatgact acgtgcgcgc cagcatccgc
     1981 gggggccgct gctaccccac ctacattggc atccttgatg agcccctcta cgtctacgac
     2041 atctgcggca tgtacgcctc cgcgctcacc caccccatgc cctggggcac gccccttagt
     2101 ccctacgagc gcgcgctggc cgtgcgcgaa tggcaagctt ctctggacga tctgggcacc
     2161 tgcataagct acttcgaccc cgacctcctg ccaggcatct tcaccatcga tgctgacccc
     2221 cccgacgagc ttatgctgga ccccctgccc cccttctgct cgcgcaaggg cggccgcctc
     2281 tgctggacca acgagcccct gcgcggcgag gtggccacca gcgttgacct catcaccctg
     2341 cataaccggg gctggcaggt cagaatcgtg ccagacgagc taaccaccgt cttccccgaa
     2401 tggaagtgcg tggcgcgcga gtacgtgcag ctcaacatcg ccgccaagga gcgcgccgac
     2461 aaggaaaaga accagaccat gcgctccatc gccaagctcc tctccaacgc cctctacggc
     2521 tccttcgcca ccaaactcga caacaaaaag attgtctttt ctgaccagat ggacgagggg
     2581 ctcttgaaag gcatctccgc cggcaccgtc aatatcaaat cctcctcgtt tctagaaact
     2641 gacaacctga gtgcggaggt catgcccgcc tttgagaggg aatacctacc ccaacagctg
     2701 gcgctcctgg acagcgatcc ggaagacagt gaagacgagc agcggcccgc ccccttttat
     2761 acccccccgg ccgggacccc cggtcacgtg gcctacactt acaagccaat caccttcctg
     2821 gatgtggacg agggggacat gtgtttgcat acactggaga aggtggaccc gctggtggat
     2881 aacgaccgct atccctccca cgtggcctcc ttcgtgctgg cttggacccg ggccttcgtc
     2941 tcagagtggt cgggtttcct ctacgacgag gaccgcggcg tcccactcga ggaccgaccc
     3001 ataaagtcgg tttacgggga cacggacagc ctctttgtca cccagcgggg acacgagctc
     3061 atggagacca gaggtaagaa acgcatcaaa aagaacggcg gaaaactggt ttttgatccc
     3121 aatcagcccg acctcacctg gctcgtggag tgcgagaccg tctgcgccca ctgcggcgcg
     3181 gacgcctacg cccccgagtc cgtcttcctc gcccccaagc tctacgccct caagtccctc
     3241 ctctgtcccg cctgtgggca gacttccaaa ggtaagctcc gcgccaaagg ccacgcggcc
     3301 gaggcgctca actacgaact catggtcaat tgctacctgg ccgacgcaca gggcgccgat
     3361 cgggagcggt tctcgaccag ccggatgagc ctgaagcgca ccctcgcaag cgcccagccc
     3421 ggcgcgcacc cctttaccgt gacggagacc accctgacgc ggacgctgcg accctggaag
     3481 gaccggaccc tggccgcgct ggacgcccat cgtctggcgc cctactcccg cagtcgcccc
     3541 aacccgcgaa acgaggaggt ctgctggatc gagatgccgt ag
//