LOCUS L19443 1341 bp DNA linear VRL 14-AUG-2003
DEFINITION Human adenovirus F, complete genome.
ACCESSION L19443 REGION: complement(join(3650..4977,5256..5268))
VERSION L19443.1 GI:303969
KEYWORDS .
SOURCE Human adenovirus F
 ORGANISM Human adenovirus F
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 1341)
 AUTHORS van Loon,A.E., Ligtenberg,M., Reemst,A.M., Sussenbach,J.S. and
 Rozijn,T.H.
 TITLE Structure and organization of the left-terminal DNA regions of
 fastidious adenovirus types 40 and 41
 JOURNAL Gene 58 (1), 109-126 (1987)
 PUBMED 2961652
REFERENCE 2 (bases 1 to 1341)
 AUTHORS Ishino,M., Sawada,Y., Yaegashi,T., Demura,M. and Fujinaga,K.
 TITLE Nucleotide sequence of the adenovirus type 40 inverted terminal
 repeat: close relation to that of adenovirus type 5
 JOURNAL Virology 156 (2), 414-416 (1987)
 PUBMED 3811242
REFERENCE 3 (bases 1 to 1341)
 AUTHORS Ishino,M.
 TITLE Analysis of structure and function of human adenovirus type 40
 leftmost 1.85 kb region including transforming E1A gene
 JOURNAL Sapporo Igaku Zasshi 57, 59-66 (1988)
REFERENCE 4 (bases 1 to 1341)
 AUTHORS Vos,H.L., van der Lee,F.M., Reemst,A.M., van Loon,A.E. and
  Sussenbach,J.S.
 TITLE The genes encoding the DNA binding protein and the 23K protease of
 adenovirus types 40 and 41
 JOURNAL Virology 163 (1), 1-10 (1988)
 PUBMED 3279700
REFERENCE 5 (bases 1 to 1341)
 AUTHORS Ishino,M., Ohashi,Y., Emoto,T., Sawada,Y. and Fujinaga,K.
 TITLE Characterization of adenovirus type 40 E1 region
 JOURNAL Virology 165 (1), 95-102 (1988)
 PUBMED 2968714
REFERENCE 6 (bases 1 to 1341)
 AUTHORS Kidd,A.H. and Erasmus,M.J.
 TITLE Sequence characterization of the adenovirus 40 fiber gene
 JOURNAL Virology 172 (1), 134-144 (1989)
 PUBMED 2773314
REFERENCE 7 (bases 1 to 1341)
 AUTHORS Toogood,C.I., Murali,R., Burnett,R.M. and Hay,R.T.
 TITLE The adenovirus type 40 hexon: sequence, predicted structure and
 relationship to other adenovirus hexons
 JOURNAL J. Gen. Virol. 70 (Pt 12), 3203-3214 (1989)
 PUBMED 2481711
REFERENCE 8 (bases 1 to 1341)
 AUTHORS Davison,A.J., Telford,E.A., Watson,M.S., McBride,K. and Mautner,V.
 TITLE The DNA sequence of adenovirus type 40
 JOURNAL J. Mol. Biol. 234 (4), 1308-1316 (1993)
 PUBMED 8263936
REFERENCE 9 (bases 1 to 1341)
 AUTHORS Davison,A.J., Benko,M. and Harrach,B.
 TITLE Genetic content and evolution of adenoviruses
 JOURNAL Unpublished
REFERENCE 10 (bases 1 to 1341)
 AUTHORS Davison,A.J.
 TITLE Direct Submission
 JOURNAL Submitted (26-JUL-1993) MRC Virology Unit, Church Street, Glasgow
 G11 5JR, UK
FEATURES Location/Qualifiers
 source 1..1341
 /organism="Human adenovirus F"
 /mol_type="genomic DNA"
 /isolate="Dugan"
 /db_xref="taxon:130309"
 /tissue_lib="ATCC VR-931"
 mRNA <13..>14
 /product="pol"
 mRNA <13..>14
 /product="pTP"
 CDS <13..>14
  /codon_start=1
 /product="pol"
 /protein_id="AAC13953.1"
 /db_xref="GI:303975"
 /translation="MALVPSPRAGGFLPAETHSGPQPPRRRVRQSTAGAAPTATRAPR
 RRAATASPGEPPSTTASGRPPAANNVSLTPNSRLRGTIVAPRGQGLLYAIDTATNSPM
 EIKFHRRLASALTRLLQVNLRSVPADLNEAFLDSLDSSQIRTLALKLKVPRVEVWTCG
 SRGVVVPSIIHPQQERAGAEEGDEGERQDTEDFLNFPLRFLVRGRQVHLIQEMQSVQR
 CEYCARFYKYQHECTVRRRDFYFHHINAHSSGWWQKINFFPIGSHPRVERLFVTYDVE
 TYTWMGAFGKQLVPFMLVMHLSGEEALVKEACRLACELQWDTWGNDERTFYVVTPEKL
 AVGKKFREYRNRLQAHFALQLWRGFLAANPQLAEWACLEMGLFSPDYLTYEELQKAPK
 LQGRPRFLELYIVGHNINGFDEIVLAAQVINNRSDVPGPFKITRNFMPRAGKILFNDI
 TFALPNPSSKKRTDYRLWEQGACDDSDFKYQFLKVMVRDTFALTHTSLRKAAQAYTLP
 VEKGCCPYKAVNEFYMLGSYRADERGFPAEDYWKDREEYLLNRELWEKKQCPHYDLVR
 ETLDYCALDVLVTAALVQKLRESYAQFIRDAVGLPEASFNVFQRPTISSNSHAIFRQI
 LYRTVKPQRSDLGGSLLAPSHEMYDYVRASIRGGRCYPTYIGVLREPLYVYDICGMYA
 SALTHPMPWGFPLNPYERALAVRDWEHALLQVGTPIDYFNRTLLPGIFTIDADPPPEN
  LLDVLPPLCSRKGGRLCWTNEPLRGEVVTSVDLITLHNRGWHVRLLPDERATVFPEWR
 CVAKEYVHLNITAKERADREKNQTLRSIAKLLSNALYGSFATKLDNKKIVFSDQMDSA
 TIKSIAAGQINIKSTSFVETDTLSAEVMPTFQRAYSPEQLAVVHSDAEESDEEPGHAP
 FYTPTHKPNDHVTYTYKPITFMDAEEDDLCLHTLEKVDPLVENNRYPSQIASFVLAWT
 RAFVSEWSEILYAEDRGTPLEQRTLKSVYGDTDSLFVTEAGYRLMETRGKKRIKKHGG
 NLVFDPKHPELAWLVECETVCAQCGADAYSPESVFLAPKLYALKCLRCPSCQQISKGK
 LRAKGHAAETLNYDLMLKCYLADFQGEDARFHTSRMSLKRTLASAQPGARPFTVTETN
 LTRTLRPWKDITLAPLDAHRLVPYSQSRPNPRNQEVCWIEMP"
 mRNA 1..1341
 /product="IVa2"
 CDS 1..1341
 /codon_start=1
  /product="IVa2"
 /protein_id="AAC13952.1"
 /db_xref="GI:303974"
 /translation="METRGRRRAFSHQQDEPEENPGKRPTRSAPLYRHRNQPNANPAT
 LERHYPCSTGRPPTGTVQPKPSQPPQPRSLLDRDAIDHITELWDRLYLLRQSLEKMTM
 ADGLKPLKHFRSLEELLSLGGERLLQDLVKENQHVRSMMNEVTPLLREDGSCISLNYQ
 LQPVIGVIYGPTGCGKSQLLRNLLSTQLINPPPETVFFIAPQVDMIPPSEIKAWEMQI
  CEGNYAPGPEGTIIPQSGTLLPRFIKMAYDELTLEQNYDVSHPDNIFAKAASQGPIAI
 IMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIANL
 KIQAKMHLISPRMHPSQLNRFVNTFTKGLPLAISLLLKDIFQFHAQKPCYDWIIYNTT
 PEHDALQWSYLHPRDGLMPMYLNIQAHLYRVLENIHKVLNDRDRWSRAYRKRNK"
 polyA_signal 1333..1338
 /note="for IVa2 and E2B"
 polyA_signal <1337..1341
 /note="for IVa2 and E2B"
ORIGIN 
 1 atggaaacac gagggcgaag acgcgcgttt tcacaccagc aggatgagcc tgaagagaac
 61 cctggcaagc gcccaacccg gagcgcgccc ctttaccgtc accgaaacca acctaacgcg
 121 aaccctgcga ccctggaaag acattaccct tgctccactg gacgcccacc gactggtacc
 181 gtacagccaa agccgtccca acccccgcaa ccaagaagtt tgttggatcg agatgccata
 241 gaccatatta ccgagctctg ggatcggctc tatttgctgc gtcaatccct tgaaaaaatg
 301 accatggccg atggcctaaa accactaaag catttccgca gcttggaaga gctactttcc
 361 ctgggcggtg agcgtctctt gcaagacttg gttaaagaaa accagcatgt cagaagcatg
 421 atgaacgaag tcactccgct tttgcgggaa gatggcagtt gcatctcctt aaactatcaa
 481 ctacagcctg tcattggggt catttacggt cccactggct gcggcaaatc ccagcttttg
 541 cgaaacttgc tttccaccca gcttattaac cctccacccg aaaccgtttt ttttattgcc
 601 cctcaggtgg acatgatccc cccctcagaa attaaggctt gggagatgca aatctgcgag
 661 ggtaactacg ccccaggtcc agaagggacc attatacccc agtcgggcac ccttttacca
 721 cgcttcatca aaatggccta tgacgagctt accctggagc aaaactacga tgtttcccac
 781 cccgataaca tttttgctaa ggctgcatcc caaggcccca tcgccatcat tatggatgag
 841 tgcatggaaa atttgggagg gcacaaaggg gtttccaagt ttttccacgc cttcccttcc
 901 aagttgcatg acaaattccc caagtgcacc ggctataccg tgctagtggt tctgcacaac
 961 atgaacccca gacgtgatct cggtggcaac attgccaacc taaaaattca ggccaaaatg
 1021 catctgattt cccctcgcat gcatccctcc caacttaatc gatttgttaa taccttcacc
 1081 aaggggctac ctctggccat tagcctcctc cttaaggaca tcttccagtt tcatgctcaa
 1141 aaaccctgct acgattggat tatttacaac accaccccag agcatgacgc cctccagtgg
 1201 tcctacctgc atcccaggga cggcctaatg cctatgtatt tgaacatcca agcccacctg
 1261 taccgggtct tggaaaacat ccataaagtt ttaaacgacc gcgacaggtg gtctagggcc
 1321 taccgcaaaa gaaataaata a
//