LOCUS       L19443                  1941 bp    DNA     linear   VRL 14-AUG-2003
DEFINITION  Human adenovirus F, complete genome.
ACCESSION   L19443 REGION: complement(join(8106..10037,13180..13188))
VERSION     L19443.1  GI:303969
KEYWORDS    .
SOURCE      Human adenovirus F
  ORGANISM  Human adenovirus F
            Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   van Loon,A.E., Ligtenberg,M., Reemst,A.M., Sussenbach,J.S. and
            Rozijn,T.H.
  TITLE     Structure and organization of the left-terminal DNA regions of
            fastidious adenovirus types 40 and 41
  JOURNAL   Gene 58 (1), 109-126 (1987)
   PUBMED   2961652
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Ishino,M., Sawada,Y., Yaegashi,T., Demura,M. and Fujinaga,K.
  TITLE     Nucleotide sequence of the adenovirus type 40 inverted terminal
            repeat: close relation to that of adenovirus type 5
  JOURNAL   Virology 156 (2), 414-416 (1987)
   PUBMED   3811242
REFERENCE   3  (bases 1 to 1941)
  AUTHORS   Ishino,M.
  TITLE     Analysis of structure and function of human adenovirus type 40
            leftmost 1.85 kb region including transforming E1A gene
  JOURNAL   Sapporo Igaku Zasshi 57, 59-66 (1988)
REFERENCE   4  (bases 1 to 1941)
  AUTHORS   Vos,H.L., van der Lee,F.M., Reemst,A.M., van Loon,A.E. and
            Sussenbach,J.S.
  TITLE     The genes encoding the DNA binding protein and the 23K protease of
            adenovirus types 40 and 41
  JOURNAL   Virology 163 (1), 1-10 (1988)
   PUBMED   3279700
REFERENCE   5  (bases 1 to 1941)
  AUTHORS   Ishino,M., Ohashi,Y., Emoto,T., Sawada,Y. and Fujinaga,K.
  TITLE     Characterization of adenovirus type 40 E1 region
  JOURNAL   Virology 165 (1), 95-102 (1988)
   PUBMED   2968714
REFERENCE   6  (bases 1 to 1941)
  AUTHORS   Kidd,A.H. and Erasmus,M.J.
  TITLE     Sequence characterization of the adenovirus 40 fiber gene
  JOURNAL   Virology 172 (1), 134-144 (1989)
   PUBMED   2773314
REFERENCE   7  (bases 1 to 1941)
  AUTHORS   Toogood,C.I., Murali,R., Burnett,R.M. and Hay,R.T.
  TITLE     The adenovirus type 40 hexon: sequence, predicted structure and
            relationship to other adenovirus hexons
  JOURNAL   J. Gen. Virol. 70 (Pt 12), 3203-3214 (1989)
   PUBMED   2481711
REFERENCE   8  (bases 1 to 1941)
  AUTHORS   Davison,A.J., Telford,E.A., Watson,M.S., McBride,K. and Mautner,V.
  TITLE     The DNA sequence of adenovirus type 40
  JOURNAL   J. Mol. Biol. 234 (4), 1308-1316 (1993)
   PUBMED   8263936
REFERENCE   9  (bases 1 to 1941)
  AUTHORS   Davison,A.J., Benko,M. and Harrach,B.
  TITLE     Genetic content and evolution of adenoviruses
  JOURNAL   Unpublished
REFERENCE   10 (bases 1 to 1941)
  AUTHORS   Davison,A.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUL-1993) MRC Virology Unit, Church Street, Glasgow
            G11 5JR, UK
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Human adenovirus F"
                     /mol_type="genomic DNA"
                     /isolate="Dugan"
                     /db_xref="taxon:130309"
                     /tissue_lib="ATCC VR-931"
     mRNA            complement(791..880)
                     /product="fiber-2"
     mRNA            complement(791..880)
                     /product="fiber-1"
     mRNA            complement(791..880)
                     /product="100K"
     mRNA            complement(791..880)
                     /product="22K"
     mRNA            complement(791..880)
                     /product="33K"
     mRNA            complement(791..880)
                     /product="pVIII"
     mRNA            join(<1..9,1740..1941)
                     /product="pol"
     mRNA            <1..1941
                     /product="pTP"
     mRNA            complement(791..880)
                     /product="pVI"
     mRNA            complement(791..880)
                     /product="hexon"
     mRNA            complement(791..880)
                     /product="protease"
     mRNA            complement(791..880)
                     /product="III"
     mRNA            complement(791..880)
                     /product="pVII"
     mRNA            complement(791..880)
                     /product="V"
     mRNA            complement(791..880)
                     /product="pX"
     CDS             join(1..9,1740..1941)
                     /codon_start=1
                     /product="pol"
                     /protein_id="AAC13953.1"
                     /db_xref="GI:303975"
                     /translation="MALVPSPRAGGFLPAETHSGPQPPRRRVRQSTAGAAPTATRAPR
                     RRAATASPGEPPSTTASGRPPAANNVSLTPNSRLRGTIVAPRGQGLLYAIDTATNSPM
                     EIKFHRRLASALTRLLQVNLRSVPADLNEAFLDSLDSSQIRTLALKLKVPRVEVWTCG
                     SRGVVVPSIIHPQQERAGAEEGDEGERQDTEDFLNFPLRFLVRGRQVHLIQEMQSVQR
                     CEYCARFYKYQHECTVRRRDFYFHHINAHSSGWWQKINFFPIGSHPRVERLFVTYDVE
                     TYTWMGAFGKQLVPFMLVMHLSGEEALVKEACRLACELQWDTWGNDERTFYVVTPEKL
                     AVGKKFREYRNRLQAHFALQLWRGFLAANPQLAEWACLEMGLFSPDYLTYEELQKAPK
                     LQGRPRFLELYIVGHNINGFDEIVLAAQVINNRSDVPGPFKITRNFMPRAGKILFNDI
                     TFALPNPSSKKRTDYRLWEQGACDDSDFKYQFLKVMVRDTFALTHTSLRKAAQAYTLP
                     VEKGCCPYKAVNEFYMLGSYRADERGFPAEDYWKDREEYLLNRELWEKKQCPHYDLVR
                     ETLDYCALDVLVTAALVQKLRESYAQFIRDAVGLPEASFNVFQRPTISSNSHAIFRQI
                     LYRTVKPQRSDLGGSLLAPSHEMYDYVRASIRGGRCYPTYIGVLREPLYVYDICGMYA
                     SALTHPMPWGFPLNPYERALAVRDWEHALLQVGTPIDYFNRTLLPGIFTIDADPPPEN
                     LLDVLPPLCSRKGGRLCWTNEPLRGEVVTSVDLITLHNRGWHVRLLPDERATVFPEWR
                     CVAKEYVHLNITAKERADREKNQTLRSIAKLLSNALYGSFATKLDNKKIVFSDQMDSA
                     TIKSIAAGQINIKSTSFVETDTLSAEVMPTFQRAYSPEQLAVVHSDAEESDEEPGHAP
                     FYTPTHKPNDHVTYTYKPITFMDAEEDDLCLHTLEKVDPLVENNRYPSQIASFVLAWT
                     RAFVSEWSEILYAEDRGTPLEQRTLKSVYGDTDSLFVTEAGYRLMETRGKKRIKKHGG
                     NLVFDPKHPELAWLVECETVCAQCGADAYSPESVFLAPKLYALKCLRCPSCQQISKGK
                     LRAKGHAAETLNYDLMLKCYLADFQGEDARFHTSRMSLKRTLASAQPGARPFTVTETN
                     LTRTLRPWKDITLAPLDAHRLVPYSQSRPNPRNQEVCWIEMP"
     CDS             1..1941
                     /codon_start=1
                     /product="pTP"
                     /protein_id="AAC13954.1"
                     /db_xref="GI:303976"
                     /translation="MALSVQDCARLTGQSVPAMERFSPLRNIWNRVREYARAATTAAG
                     ITWLSRYVYHYHRLMLEDLAPGTPATLRWPLYREPPPHFLVGYQYLVRTCNDYVFESR
                     AYSRLRYTEITQPGMQVVNWSVMANCTYTINTGSYHRFVDLDDFQNTLTQIQQAVLAE
                     RVVADLALLQPLRGFGSTRMADRGELEIPVESLMQDYYKDLRRCQNEAWGMADRLRIQ
                     QAGPKDVTLLATIRRLKTAYFNFLISSITSSAASLRIPHATVLSLPCDCDWLEAFLEK
                     FSDPVQLDSLNEAWQSLPMQQMIRCTVSALSLPQGPHLLPPLSGSGMQGGVFELRPRE
                     NGRAVTETMRRRRGEMIQRFIDRLPVRRRRRRQPVPAPVSPEGPAVEEEEFMEIEETP
                     AAFEQEVRETVAEAIRLLQEELTFAARNSQFFNFAVDFYEAMDRLEALGDINEMTLRR
                     WVMYFFVCEHIATTLNYLFQRLRNYAVFARHVELNIAQVVMRARNTVGDVVYSRVWNE
                     NGLNAFSQLMRRISNDLAATVERAGHGELQDEEIDQFMSEIAYQDNSGDVQEILRQAA
                     VNDADIDSVELSFRFRVRGPVVFSQRRHIQDLNRRVVAYASQLRAQHQPLPELHADVP
                     LPPLQANPHPPLPPDARPQRTM"
     mRNA            complement(791..880)
                     /product="52K"
     mRNA            complement(791..880)
                     /product="pIIIa"
ORIGIN      
        1 atggctctga gcgtacaaga ttgcgcccgt ctgactggtc aaagcgtgcc cgccatggaa
       61 cgcttctccc cgttgcgtaa catctggaac cgcgttcgcg aatacgcccg cgccgccact
      121 accgccgccg gcatcacctg gctctctcga tatgtttacc actaccatcg ccttatgctg
      181 gaggacctgg cccccggtac gcccgccaca cttcgctggc ccctttaccg cgagccgccg
      241 ccccacttcc ttgttggcta ccagtacttg gttcgcacct gcaacgacta cgtttttgaa
      301 tccagagcct actcgcgcct taggtatacc gagattacac agcccgggat gcaagtagtc
      361 aactggtccg tcatggccaa ctgcacgtac accatcaaca ccggttccta ccaccgcttt
      421 gtggacttgg atgatttcca aaacacttta actcagatac agcaggctgt gctcgccgaa
      481 cgcgtagttg ccgacttggc cctgctgcag cccctgcgcg ggtttggttc cacacgcatg
      541 gccgaccgag gggaattgga aatacccgta gaaagtctca tgcaagatta ttacaaggac
      601 ctgcgccgat gtcagaacga agcttggggc atggcagacc gcctgcgaat tcaacaggcc
      661 ggaccaaaag acgtcactct ccttgccacc atccgccgtt tgaagaccgc ctacttcaat
      721 ttcctcatca gcagcatcac ctcctctgct gcctccctta gaatccctca tgccaccgtc
      781 cttagcttac cttgcgactg cgattggctg gaagctttcc tcgaaaaatt ctctgatccc
      841 gtccaactgg actcgctcaa tgaggcttgg cagtctctac ctatgcaaca gatgataaga
      901 tgcacagtta gcgccctgtc gctgcctcag gggccccacc tacttcctcc cctctccggc
      961 tcgggcatgc aaggcggcgt ctttgaactt cgcccccgag aaaacgggcg cgccgtcacc
     1021 gaaaccatgc gtcgccgtcg cggagaaatg attcaacgtt tcattgaccg gctgcccgtc
     1081 cggcgccgtc gtcgacgaca acccgtccca gcgccggtca gccccgaggg tcccgctgtg
     1141 gaggaagagg agtttatgga aatcgaggaa acgccggcag ccttcgaaca agaggtgcgc
     1201 gaaactgtag ccgaggcaat tcggctcctg caagaggagt tgacgtttgc ggcgcgcaac
     1261 tcccagttct tcaacttcgc ggttgacttc tacgaggcaa tggaccgctt ggaagccctc
     1321 ggagatatta acgaaatgac gcttcggcgc tgggtcatgt acttctttgt ttgcgagcac
     1381 attgccacca cgctcaacta cctcttccag cgtctacgca actacgccgt ctttgcaaga
     1441 cacgtagaac tgaacattgc acaagtggtg atgcgcgccc gaaacactgt tggcgacgtg
     1501 gtctacagcc gcgtgtggaa cgaaaacggt cttaacgctt tctcccagct catgaggcgc
     1561 atctctaatg accttgcagc cacggtggag cgcgcaggac acggagaact ccaggacgaa
     1621 gagattgacc agtttatgtc ggagattgcc taccaagaca actctggcga cgtgcaggag
     1681 attctgcgac aagccgcggt caacgatgcc gatattgatt ctgttgaact ctctttcagg
     1741 ttccgagtcc gagggccggt ggttttctcc cagcggagac acattcagga cctcaaccgc
     1801 cgcgtcgtcg cgtacgccag tcaactgcgg gcgcagcacc aaccgctacc cgagctccac
     1861 gccgacgtgc cgctaccgcc tctccaggcg aacccccatc caccactgcc tccggacgcc
     1921 cgcccgcagc gaacaatgta a
//