LOCUS DQ923122 1344 bp DNA linear VRL 14-JUN-2007
DEFINITION Human adenovirus 52 isolate T03-2244, complete genome.
ACCESSION DQ923122 REGION: complement(join(3599..4929,5208..5220))
VERSION DQ923122.2 GI:124375632
KEYWORDS .
SOURCE Human adenovirus 52
 ORGANISM Human adenovirus 52
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus;
 unclassified Human adenoviruses.
REFERENCE 1 (bases 1 to 1344)
 AUTHORS Jones,M.S., Harrach,B., Ganac,R.D., Gozum,M.M., Dela Cruz,W.P.,
 Riedel,B., Pan,C., Delwart,E.L. and Schnurr,D.P.
 TITLE New adenovirus species found in a patient presenting with
 gastroenteritis
 JOURNAL J. Virol. 81 (11), 5978-5984 (2007)
 PUBMED 17360747
REFERENCE 2 (bases 1 to 1344)
 AUTHORS Jones,M.S., dela Cruz,W. and Schnurr,D.
 TITLE Discovery of a novel adenovirus from a patient presenting with
 gastroenteritis
 JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1344)
 AUTHORS Jones,M.S., dela Cruz,W. and Schnurr,D.
 TITLE Direct Submission
 JOURNAL Submitted (19-MAY-2005) Clinical Investigation Facility, David
  Grant USAF Medical Center, 101 Bodin Circle, Travis AFB, CA 94535,
 USA
 REMARK Nucleotide sequence updated by submitter
REFERENCE 4 (bases 1 to 1344)
 AUTHORS Jones,M.S. Jr., Delwart,E.L. and Schnurr,D.
 TITLE Direct Submission
 JOURNAL Submitted (25-AUG-2006) CIF, David Grant USAF Medical Center, 101
 Bodin Circle, Travis AFB, CA 94535, USA
REFERENCE 5 (bases 1 to 1344)
 AUTHORS Jones,M.S. Jr., Delwart,E.L. and Schnurr,D.
 TITLE Direct Submission
 JOURNAL Submitted (01-FEB-2007) CIF, David Grant USAF Medical Center, 101
 Bodin Circle, Travis AFB, CA 94535, USA
 REMARK Sequence update by submitter
COMMENT On Feb 1, 2007 this sequence version replaced gi:117503035.
FEATURES Location/Qualifiers
 source 1..1344
 /organism="Human adenovirus 52"
 /mol_type="genomic DNA"
 /isolate="T03-2244"
 /db_xref="taxon:332179"
 /country="USA"
 gene <13..>14
 /gene="pol"
 CDS  <13..>14
 /gene="pol"
 /codon_start=1
 /product="pol"
 /protein_id="ABK35035.1"
  /db_xref="GI:117503041"
 /translation="MALVQDPGTGGLHAETAHPGPQPPRRRPRQQSPGSSSTAAESSR
 KRASASIAPRRRAASAPRRSPSTSEIKSPRGTVVAPRGHGLLYAVDASSNTPLEIKYH
 LHLAHALTGLLKVNLQTLPVDLSAAALDSLDSGQLRPLLQRLRPSVAEIWTCGTRGVV
 VPTVVHPEKKGADADSHRQGEGDAAPPSPRLNFPLRFLVRGRKAHLIQEIQSVQRCDY
 CGRFYKHQHECSVRRRDFYFHHINTHSSNWWQEISFFPIGSHARTQRLFVTYDVETYT
 WMGSFGKQLVPFMLVMHVSGEETLVRQACELALELRWDVWNDRPCTFYVVTPEKMAVG
 KKFREFRDRLQTLLALDLWSSFLAANPQLSDWARAELGLSSPDCLTYEELKKAPALKG
 QPRFIELYIVGHNINGFDEIVLAAQVINNRSDVPGPFRISRNFMPRAGKILFNDVTFA
 LPNPRQKKRTDFTLWEQGACDDTDFKHQYLKVMVRDTFALTHTSLRKAAQAYALPVEK
  GCCPYKAVNEFYMLGSYRADEKGFPAEEYWKDREEYLLNRELWEKKQETAYNLVRETL
 DYCALDVLVTAALVDKLRESYAQFIQDSVGLPGANFNVFQRPTISSNSHAIFRQILYR
 AEKPRKTHLGDGLMAPSHEMYDYVRASIRGGRCYPTYIGVLREPLYVYDICGMYASAL
 THPMPWGPPLNPYERALAVKKWDEALQDTDTQIDYFNQVLLPGIFTIDADPPPANLLD
 PLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWRVRILPDERTAVFPEWRCVA
 REYVQLNIAAKERADREKNQTLRSIAKLLSNALYGSFATKLDNKKIVFSDQMDPSTIK
 SIAAGHVNIKSSSFVETDNLSAEIMPAFERAYSPEQLALVHSDAEESDGEGGHAPFYT
 PLGGAGHVTYTYKPITFVDAEEDDLCLHTLEKVDPLIENDRYPSQIASFVLAWTRAFV
 SEWSQFLYAEDLGTPLEDRPLKSVYGDTDSLFVTEAGHRLMETQGKKRIKKNGGNLVF
 DPAKPELTWLVECETVCAQCGADAYSPESVFLAPKLYALKCLHCTKCQHVSKGKLRAK
 GHAAESLSYDLMLRCYLADSQGDDARFSTSRMSLKRTLASAQPGAHPFTVTETTLTRT
 LRPWKDRTLAALDAHRLVPYSESRPNPRNQEVCWIEIP"
 gene <13..>14
 /gene="IVa2"
 CDS 1..1344
 /gene="IVa2"
 /codon_start=1
 /product="IVa2"
 /protein_id="ABK35034.1"
 /db_xref="GI:117503040"
 /translation="METQGRRRPLQHQQDEPEAHPRKRPARGSSLHRHRDHPHPNTET
 LEGQNPRGPGRPPAGALQRKSAQPPQPRSLLDRDSIEHVTELWDRLYLLRQSLEKMPM
 ADGLKPLKHFNSLEELLSLGGERLLQNLVSENKHVRSMMNDVAPLLRPDGSCSSLNYQ
 LQPVIGVIYGPTGCGKSQLLRNLLSTQLINPPPETVFFIAPQVDMIPPSEIKAWEMQI
 CEGNYAPGPDGTIIPQSGTLLPRFVKMAYDELTLEQNYDVSNPQNVFAKAAARGPIAI
 IMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIANL
 KIQAKMHIISPRMHPSQLNRFVNTYTKGLPLAISLLLKDIFQFHAQKPCYDWVIYNTT
 PEHDALQWSYLHPRDGLMPMYLNIQAHLYRVLENIHKVLNDRDRWTRAYRAKKNK"
 polyA_signal <1340..1344
 /gene="IVa2"
  /note="IVa2 and E2B"
ORIGIN 
 1 atggagacgc aagggagacg acgcccgctt cagcaccagc aggatgagcc tgaagcgcac
 61 cctcgcaagc gcccagcccg gggctcatcc cttcaccgtc accgagacca ccctcacccg
 121 aacactgaga ccctggaagg acagaaccct cgcggccctg gacgcccacc ggctggtgcc
 181 ctacagcgaa agtcggccca acccccgcaa ccaagaagtc tgctggatcg agattccata
 241 gagcacgtca ccgagctctg ggaccgactg tacttgcttc gtcagtcgct tgaaaagatg
 301 cccatggcag acggcctgaa accgctgaaa cacttcaaca gcctggaaga actcttatcc
 361 ctgggtgggg agaggctctt gcaaaactta gtgagtgaaa ataaacatgt cagaagcatg
 421 atgaacgatg tagcccccct cctgcgcccc gacggcagct gttcctctct caactaccag
 481 ctgcaacccg tcatcggggt catctacggt cccaccggct gcggcaaatc ccaactgttg
 541 cgtaacttgc tttccaccca gctcatcaat cccccgccag aaaccgtgtt ctttatcgcc
 601 ccccaggtgg acatgatacc cccctcggaa attaaggcct gggaaatgca gatttgtgag
 661 ggcaactacg ccccaggccc agatggaact atcatccccc agtcgggcac cctcctaccc
 721 cgctttgtta agatggccta tgatgagctc actctagagc aaaactatga tgtttccaac
 781 ccccaaaacg tgtttgccaa agcggccgcc aggggtccca ttgccatcat tatggatgag
 841 tgcatggaaa acctaggagg ccacaagggg gtctctaaat tcttccacgc cttcccctcc
 901 aaactgcatg acaagttccc caagtgcacc ggctacaccg tgctggtggt ccttcataac
 961 atgaaccccc gcagggacct aggtggtaac atagctaacc tcaaaattca agccaagatg
 1021 catatcatct ccccccgcat gcatccctcc cagcttaacc gctttgttaa cacctacact
 1081 aaggggctgc ccttggccat cagcctgctc ctaaaggaca tcttccagtt ccacgctcag
 1141 aaaccctgct acgactgggt tatttacaac accaccccgg agcatgacgc tctgcaatgg
 1201 tcctatctcc acccccggga tggcctcatg cccatgtact tgaacatcca agcccatctg
 1261 taccgggtct tggaaaacat acacaaggtc cttaacgacc gggacaggtg gacccgagcc
 1321 taccgagcca aaaaaaacaa ataa
//