LOCUS DQ923122 3555 bp DNA linear VRL 14-JUN-2007
DEFINITION Human adenovirus 52 isolate T03-2244, complete genome.
ACCESSION DQ923122 REGION: complement(join(4702..8247,13071..13079))
VERSION DQ923122.2 GI:124375632
KEYWORDS .
SOURCE Human adenovirus 52
 ORGANISM Human adenovirus 52
 Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus;
 unclassified Human adenoviruses.
REFERENCE 1 (bases 1 to 3555)
 AUTHORS Jones,M.S., Harrach,B., Ganac,R.D., Gozum,M.M., Dela Cruz,W.P.,
 Riedel,B., Pan,C., Delwart,E.L. and Schnurr,D.P.
 TITLE New adenovirus species found in a patient presenting with
 gastroenteritis
 JOURNAL J. Virol. 81 (11), 5978-5984 (2007)
 PUBMED 17360747
REFERENCE 2 (bases 1 to 3555)
 AUTHORS Jones,M.S., dela Cruz,W. and Schnurr,D.
 TITLE Discovery of a novel adenovirus from a patient presenting with
 gastroenteritis
 JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3555)
 AUTHORS Jones,M.S., dela Cruz,W. and Schnurr,D.
 TITLE Direct Submission
 JOURNAL Submitted (19-MAY-2005) Clinical Investigation Facility, David
 Grant USAF Medical Center, 101 Bodin Circle, Travis AFB, CA 94535,
 USA
 REMARK Nucleotide sequence updated by submitter
REFERENCE 4 (bases 1 to 3555)
 AUTHORS Jones,M.S. Jr., Delwart,E.L. and Schnurr,D.
 TITLE Direct Submission
 JOURNAL Submitted (25-AUG-2006) CIF, David Grant USAF Medical Center, 101
 Bodin Circle, Travis AFB, CA 94535, USA
REFERENCE 5 (bases 1 to 3555)
 AUTHORS Jones,M.S. Jr., Delwart,E.L. and Schnurr,D.
 TITLE Direct Submission
 JOURNAL Submitted (01-FEB-2007) CIF, David Grant USAF Medical Center, 101
 Bodin Circle, Travis AFB, CA 94535, USA
 REMARK Sequence update by submitter
COMMENT On Feb 1, 2007 this sequence version replaced gi:117503035.
FEATURES Location/Qualifiers
 source 1..3555
 /organism="Human adenovirus 52"
  /mol_type="genomic DNA"
 /isolate="T03-2244"
 /db_xref="taxon:332179"
 /country="USA"
 gene <9..>10
 /gene="pol"
 CDS 1..3555
 /gene="pol"
 /codon_start=1
 /product="pol"
 /protein_id="ABK35035.1"
 /db_xref="GI:117503041"
 /translation="MALVQDPGTGGLHAETAHPGPQPPRRRPRQQSPGSSSTAAESSR
 KRASASIAPRRRAASAPRRSPSTSEIKSPRGTVVAPRGHGLLYAVDASSNTPLEIKYH
 LHLAHALTGLLKVNLQTLPVDLSAAALDSLDSGQLRPLLQRLRPSVAEIWTCGTRGVV
 VPTVVHPEKKGADADSHRQGEGDAAPPSPRLNFPLRFLVRGRKAHLIQEIQSVQRCDY
 CGRFYKHQHECSVRRRDFYFHHINTHSSNWWQEISFFPIGSHARTQRLFVTYDVETYT
 WMGSFGKQLVPFMLVMHVSGEETLVRQACELALELRWDVWNDRPCTFYVVTPEKMAVG
 KKFREFRDRLQTLLALDLWSSFLAANPQLSDWARAELGLSSPDCLTYEELKKAPALKG
 QPRFIELYIVGHNINGFDEIVLAAQVINNRSDVPGPFRISRNFMPRAGKILFNDVTFA
 LPNPRQKKRTDFTLWEQGACDDTDFKHQYLKVMVRDTFALTHTSLRKAAQAYALPVEK
 GCCPYKAVNEFYMLGSYRADEKGFPAEEYWKDREEYLLNRELWEKKQETAYNLVRETL
 DYCALDVLVTAALVDKLRESYAQFIQDSVGLPGANFNVFQRPTISSNSHAIFRQILYR
  AEKPRKTHLGDGLMAPSHEMYDYVRASIRGGRCYPTYIGVLREPLYVYDICGMYASAL
 THPMPWGPPLNPYERALAVKKWDEALQDTDTQIDYFNQVLLPGIFTIDADPPPANLLD
 PLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWRVRILPDERTAVFPEWRCVA
 REYVQLNIAAKERADREKNQTLRSIAKLLSNALYGSFATKLDNKKIVFSDQMDPSTIK
 SIAAGHVNIKSSSFVETDNLSAEIMPAFERAYSPEQLALVHSDAEESDGEGGHAPFYT
 PLGGAGHVTYTYKPITFVDAEEDDLCLHTLEKVDPLIENDRYPSQIASFVLAWTRAFV
 SEWSQFLYAEDLGTPLEDRPLKSVYGDTDSLFVTEAGHRLMETQGKKRIKKNGGNLVF
 DPAKPELTWLVECETVCAQCGADAYSPESVFLAPKLYALKCLHCTKCQHVSKGKLRAK
 GHAAESLSYDLMLRCYLADSQGDDARFSTSRMSLKRTLASAQPGAHPFTVTETTLTRT
 LRPWKDRTLAALDAHRLVPYSESRPNPRNQEVCWIEIP"
 gene <9..>10
 /gene="pTP"
 CDS 1..>211
 /gene="pTP"
 /codon_start=1
 /product="pTP"
 /protein_id="ABK35036.1"
 /db_xref="GI:117503042"
 /translation="MALSVQDCARLTGQSVPTMERFRPLRNIWNRVREFTRAATTSAG
 ITWLSRYIYHYHRLMLDDLSPGAPATVGWPLYREPPPHFLVGYQYLVRTCNDYVFESR
 AYSRLKYTEITQPGMQVVNWSVMANCTYTINTGAYHRFVDLDDFQTTLTQIQQAVLAE
 RVVADLALLQPLRGFGSTRMADRGEAEVPVERLMQDYYKDLRRCQSEAWGMAERLRIQ
 QAGPKDVVLLATIRRLKTAYFNYIISSITSQLPADAPQRPTVLSLPCDCDWIDAFLEK
 FSDPVDLDVLRSLHGVPTQQLIKCIVSAVSLPDGPNHLPSLHGGALRGGVFELRPREN
 GRAVTETMRRRRGEMIERFVDRLPVRRRRRRPVPVAELAEEPVPLEEEEPEEEAEAPR
 GAFEQEVRDTVADLIRLLQEELTVAARNSQFFNFAVDFYEAMERLEAIGDINEMTLRR
 WIMYFFVCEHIATTLNYLFQRLRNYAVFARHVELNVAQVVMRARDSFGNVVYSRVWNE
 NGLNAFSQLMRRISNDLAATVERAGHGDLREEEVEQFMAEIAYQDNSGDVQEILRQAA
 VNDADIDSVELSFRFRTRGPVVFTQRQHIQDLNRRVVAHASSLRARHQPLPNPHENVP
  LPPSPPGAEPPLPPGARPRRVR"
 gene <3037..3555
 /gene="IVa2"
 CDS join(3037..3049,3328..3555)
 /gene="IVa2"
 /codon_start=1
 /product="IVa2"
 /protein_id="ABK35034.1"
 /db_xref="GI:117503040"
 /translation="METQGRRRPLQHQQDEPEAHPRKRPARGSSLHRHRDHPHPNTET
  LEGQNPRGPGRPPAGALQRKSAQPPQPRSLLDRDSIEHVTELWDRLYLLRQSLEKMPM
 ADGLKPLKHFNSLEELLSLGGERLLQNLVSENKHVRSMMNDVAPLLRPDGSCSSLNYQ
 LQPVIGVIYGPTGCGKSQLLRNLLSTQLINPPPETVFFIAPQVDMIPPSEIKAWEMQI
  CEGNYAPGPDGTIIPQSGTLLPRFVKMAYDELTLEQNYDVSNPQNVFAKAAARGPIAI
 IMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIANL
 KIQAKMHIISPRMHPSQLNRFVNTYTKGLPLAISLLLKDIFQFHAQKPCYDWVIYNTT
 PEHDALQWSYLHPRDGLMPMYLNIQAHLYRVLENIHKVLNDRDRWTRAYRAKKNK"
ORIGIN 
 1 atggctctgg ttcaggaccc ggggaccggt ggtcttcacg cagagacagc acatccagga
 61 cctcaaccgc cgcgtcgtcg cccacgccag cagtctccgg gctcgtcatc aaccgctgcc
 121 gaatcctcac gaaaacgtgc ctctgcctcc atcgcccccc ggcgcagagc cgcctctgcc
 181 ccccggcgct cgccctcgac gagtgagata aagtctcctc ggggcacggt ggtagccccg
 241 cgcggacacg gcctcctcta cgccgtggac gcctcttcca acacccccct ggaaatcaag
 301 taccatttgc acctggctca cgctcttacc ggtcttctga aagtgaactt gcaaacgctt
  361 cccgtcgacc tcagcgcggc cgccctcgac tccctggaca gcgggcagct gcgccccctc
 421 ctgcagcgcc tgcgcccctc cgtggcggag atctggactt gcggcacacg gggcgtcgtc
 481 gtccccaccg tcgtccaccc agagaagaag ggcgcagacg cagactccca ccgccaaggc
 541 gaaggggatg ccgccccacc aagcccccgt ctcaacttcc ccctccggtt tctggtgcgc
 601 gggcgaaaag cgcatctcat tcaggagata cagagcgtgc agcgctgcga ctactgcggt
 661 cgcttttaca aacatcagca cgaatgctct gtgcgccggc gggacttcta ctttcaccac
 721 atcaacaccc attcctccaa ctggtggcag gagatcagct tcttcccgat cggctcccac
 781 gcgcgcaccc agcggctctt tgtcacctac gacgtagaaa cctacacatg gatgggctcg
 841 ttcgggaaac agttggtacc cttcatgctg gtcatgcacg tctcgggcga ggagaccctc
 901 gttcgccaag cctgcgagct ggccctagag ctccgatggg acgtctggaa cgaccgcccc
 961 tgcactttct acgtggtgac gccggagaaa atggccgtgg ggaaaaagtt tcgcgagttt
 1021 cgcgaccgct tgcaaactct gctagccctt gacctatgga gctctttcct cgcggctaac
 1081 cctcagctct ccgactgggc ccgggcggag ctgggtctct cctcgccgga ctgtctcacc
 1141 tacgaggagt tgaaaaaagc gccggccctc aagggacagc cgcgctttat cgaactttac
 1201 atcgtgggcc acaacatcaa cggcttcgac gagatcgtcc tggcggcgca agtcatcaac
 1261 aaccgctcgg acgtacccgg acccttcagg atctctcgca acttcatgcc ccgtgccggg
 1321 aaaatcctct ttaacgacgt caccttcgcc ctccccaatc ccaggcagaa aaagcgcacc
 1381 gacttcacgc tgtgggaaca gggtgcctgc gacgacacgg acttcaaaca tcagtacctg
 1441 aaagtgatgg tgcgggacac cttcgccctc acccacacct ctctcagaaa ggccgctcaa
 1501 gcgtacgccc tgccggtaga aaaaggctgt tgtccataca aagccgtgaa cgaattttac
 1561 atgttaggtt cttaccgagc ggacgaaaaa ggatttcccg ccgaagagta ctggaaagac
 1621 cgcgaggaat acctcctcaa tcgcgaactg tgggagaaaa aacaagagac ggcctacaac
 1681 ctggtccgcg agacgttgga ctactgcgct ctcgacgtgc tggtaaccgc agccctggtg
 1741 gacaagctcc gggaatccta cgcccagttc atccaagact ccgtgggact gcccggggcc
 1801 aactttaacg tcttccaacg ccccaccatc tcttccaact cccacgccat cttcaggcag
 1861 atcctctacc gggccgaaaa accccgcaag acccacttgg gagacgggct catggctccc
 1921 tctcacgaga tgtacgacta cgtgcgagcc agcatccgcg gggggcgctg ttaccccact
 1981 tacatcgggg tgttgaggga gcccctgtac gtgtacgaca tctgcggcat gtacgcctcg
 2041 gccctgaccc accccatgcc ctggggaccg cccctgaatc cctacgaaag ggccctcgcg
 2101 gtgaagaagt gggacgaggc gttgcaagac acggacacac aaatcgatta ttttaatcag
 2161 gttttgctac ccggcatctt caccatcgac gccgaccccc cgcccgccaa cttgctagat
 2221 cccctgcctc cgttctgctc cagaaaaggg gggcgattgt gttggaccaa cgagcccctc
 2281 cgcggggagg tggccaccag cgtggacctc atcaccctgc acaaccgcgg ctggcgcgtg
 2341 cgcatcctgc ccgacgagcg caccgccgtg ttccccgagt ggcggtgcgt ggcccgcgag
 2401 tacgtgcaac tgaacatcgc cgccaaggag agggccgatc gggagaaaaa tcagaccctg
 2461 cgctccatcg ccaagttgct ttccaacgcc ctctacgggt ctttcgccac caaacttgac
 2521 aataaaaaga tcgtgttttc tgatcagatg gacccttcca ccatcaaaag catcgccgcg
 2581 gggcacgtga atatcaaatc ctcctctttc gtagaaactg acaacttgag cgccgagatc
 2641 atgccggctt ttgagagggc ctactcaccc gaacagctgg ctctggtcca cagcgatgcg
 2701 gaagaaagtg acggggaggg tgggcacgcc cccttttata cccctttggg gggtgcgggt
 2761 cacgtgacct acacttacaa gccaatcacc ttcgtggacg cggaggagga cgacctgtgt
 2821 ctgcacaccc tggaaaaggt ggaccccctc attgaaaacg acagataccc ctcgcagatc
 2881 gcctccttcg tgttagcctg gacccgagcc tttgtctcgg agtggtccca gttcctgtac
 2941 gcggaagatc tcggaacacc tttggaagat cgccccctca agtcggtcta cggggacacc
 3001 gacagccttt ttgtcacgga agctggacac agactcatgg agacgcaagg taagaaacgc
 3061 atcaaaaaaa atggaggcaa cttggttttt gatcccgcta aacccgagct cacgtggctg
 3121 gtggagtgcg agaccgtctg cgctcagtgc ggagccgacg cctactcgcc cgagtcggtc
  3181 ttcctggccc ccaaactcta cgccctcaag tgtctgcact gcaccaaatg tcagcacgtt
 3241 tccaagggaa agctgcgcgc caagggacac gcggccgagt ccctcagcta cgacctcatg
 3301 cttcgttgct atctggccga ctcacaggga gacgacgccc gcttcagcac cagcaggatg
 3361 agcctgaagc gcaccctcgc aagcgcccag cccggggctc atcccttcac cgtcaccgag
 3421 accaccctca cccgaacact gagaccctgg aaggacagaa ccctcgcggc cctggacgcc
 3481 caccggctgg tgccctacag cgaaagtcgg cccaaccccc gcaaccaaga agtctgctgg
 3541 atcgagattc catag
//