LOCUS DQ792570 3555 bp DNA linear VRL 11-JUL-2007
DEFINITION Simian adenovirus 7, complete genome.
ACCESSION DQ792570 REGION: complement(join(3858..7403,12226..12234))
VERSION DQ792570.1 GI:110825913
KEYWORDS .
SOURCE Simian adenovirus 7
ORGANISM Simian adenovirus 7
Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus.
REFERENCE 1 (bases 1 to 3555)
AUTHORS Roy,S., Clawson,D.S. and Wilson,J.M.
TITLE Methods of Generating Chimeric Adenovirus and Uses for Such
Chimeric Adenovirus
JOURNAL Patent: PCT WO/2005/001103-A 06-JAN-2005;
University of Pennsylvania; 125 South 31st Street, TRL Suite 2000;
Pathology and Laboratory Medicine; Philadelphia, PA;
USA;
Roy,S. and Wilson,J.M.;University of Pennsylvania; 125 South 31st
Street, TRL Suite 2000; Pathology and Laboratory Medicine;
Philadelphia, PA;
USA;
REFERENCE 2 (bases 1 to 3555)
AUTHORS Roy,S., Clawson,D.S. and Wilson,J.M.
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2006) Pathology and Laboratory Medicine,
University of Pennsylvania, 125 South 31st Street, TRL Suite 2000,
Philadelphia, PA 19104-3403, USA
FEATURES Location/Qualifiers
source 1..3555
/organism="Simian adenovirus 7"
/mol_type="genomic DNA"
/strain="ATCC VR-201; 8045-2WN"
/isolation_source="tissue culture prepared from pooled
Rhesus monkey kidney cells"
/db_xref="ATCC:VR-201"
/db_xref="taxon:10532"
CDS 1..3555
/codon_start=1
/product="DNA polymerase"
/protein_id="ABH01044.1"
/db_xref="GI:110825918"
/translation="MALVQDPGAGGLHAETAHPGPQPPRRRPRQQSPGSSSTAAESSR
KRASASAAPRRRAASTPRRSPSTSEIKPPRGTVVAPRGHGLLYAVDASSNTPLEIKYH
LHLAHALTGLLKVNLQTLPADLSATSLDSLDSGQLRPLLQRLHPSVAEIWTCGTRGVV
VPTVVHPEKEDADADSHRQGEGDVAPPAPRLNFPLRFLVRGRKAHLVQEIQSVQRCDY
CGRFYKHQHECSVRRRDFYFHHINTHSSSWWQEISFFPIGSHARTQRLFVTYDVETYT
WMGSFGKQLVPFMLVMHVSGEETLVRQACELALELRWDVWNNRPNTFYVVTPEKMAVG
KKFREFRDRLQTLLALDLWSSFLAANPQLSDWARAELGLSSPDCLTYEELKKAPALKG
QPRFIELYIVGHNINGFDEIVLAAQVINNRSDVPGPFRISRNFMPRAGKILFNDVTFA
LPNPRQKKRTDFTLWEQGACDDTDFKHQYLKVMVRDTFALTHTSLRKAAQAYALPVEK
GCCPYKAVNEFYMLGSYRADEKGFPAEEYWKDREEYLLNRELWEKKQETAYNLVRETL
DYCALDVLVTAALVDKLRESYAQFIQDSVGLPGANFNVFQRPTISSNSHAIFRQILYR
AEKPHKTHLGDGLMAPSREMYDYVRASIRGGRCYPTYIGVLREPLYVYDICGMYASAL
THPMPWGPPLNPYERALAVKKWEDALQDTDTEIDYFNKILLPGIFTIDADPPPANLLD
PLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWRVRILPDERTAVFPEWRCAA
REYVQLNIAAKERADREKNQTLRSIAKLLSNALYGSFATKLDNKKIVFSDQMDPSTIK
SIAAGHVNIKSTSFVETDNLSAEIMPAFERAYSPEQLALVHSDAEESDGEGGHAPFYT
PLGGADHVTYTYKPITFVDAEEDDLCLHTLEKVDPLIENDRYPSQIASFVLAWTRAFV
SEWSQFLYAEDLGTPLEDRPLKSVYGDTDSLFVTEAGHKLMETQGKKRIKKNGGNLVF
DPAKPELTWLVECETVCAQCGADAYSPESVFLAPKLYALQCLHCTKCQHVSKGKLRAK
GHAAESLSYDLMLRCYLADSQGDDVRFSTSRMSLKRTLASAQPGAHPFTVTETTLTRT
LRPWKDRTLAALDAHRLVPYSESRPNPRNQEVCWIEIP"
CDS 1..>211
/codon_start=1
/product="pre-terminal protein"
/protein_id="ABH01045.1"
/db_xref="GI:110825919"
/translation="MALSVQDCARLTGQSVPTMERFGPLRNIWNRVREFTRAATTSAG
ITWLSRYIYHYHRLMLDDLSPGAPATVGWPLYREPPPHFLVGYQYLVRTCNDYVFESR
AYSRLKYTEITQPGMQVVNWSVMANCTYTINTGAYHRFVDLDDFQATLTQIQQAVLAE
RVVADLALLQPLRGFGSTRMADRGEAEVPVERLMQDFYKDLRRCQSEAWGMAERLRIQ
QAGPKDVVLLATIRRLKTAYFNYIISSITSQLPANAPQRPTVLSLPCDCDWIDAFLEK
FSDPVDLDVLRSLHGVPTQQLIKCIVSAVSLPDGPNHLPSLHGGALRGGVFELRPREN
GRAVTETMRRRRGEMIERFVDRLPVRRRRRRPVPVAELPEEPEPLEEEEPEEEAEAPR
GAFEQEVRDTVADLIRLLQEELTVAARNSQFFNFAVDFYEAMERLEAIGDINEMTLRR
WIMYFFVCEHIATTLNYLFQRLRNYAVFARHVELNVAQVVMRARDSFGNVVYSRVWNE
NGLNAFSQLMRRISNDLAATVERAGHGDLREEEVEQFMAEIAYQDNSGDVQEILRQAA
VNDADIDSVELSFRFRTRGPVVFTQRRHIQDLNRRVVAHASSLRARHQPLPNPHENVP
LPPLPPGAEPPLPPGARPRRVR"
CDS complement(274..732)
/codon_start=1
/product="agnoprotein"
/protein_id="ABH01043.1"
/db_xref="GI:110825917"
/translation="MGVNVVEVEVPPAHRAFVLMFVKATAVVAALHALYLLNEMRFSP
AHQKPEGEVETGGWWGDIPFALAVGVCVCVLLLWVDDGGDDDAPGAASPDLRHGGVQA
LQEGTQLPAVQGVEGSRAEVGGKRLQVHFQKTGKSVSQVQMVLDFQGGVG"
CDS join(3037..3049,3328..3555)
/codon_start=1
/product="IVa2"
/protein_id="ABH01042.1"
/db_xref="GI:110825916"
/translation="METQGRRRPLQHQQDEPEAHPRKRPARGSSLHRHRDHPHPDAET
LEGQNPRGPGRPPAGALQRKSTQPPQPRSLLDRDSIEHVTELWDRLYLLRQSLEKMPM
ADGLKPLKHFNSLEELLSLGGERLLQNLVSENKHVRSMMNEVAPLLRPDGSCSSLNYQ
LQPVIGVIYGPTGCGKSQLLRNLLSTQLINPPPETVFFIAPQVDMIPPSEIKAWEMQI
CEGNYAPGPDGTIIPQSGTLLPRFVKMAYDELTLEQNYDVSNPQNVFAKAAARGPIAI
IMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIANL
KIQAKMHIISPRMHPSQLNRFVNTYTKGLPLAISLLLKDIFQFHAQKPCYDWVIYNTT
PEHDALQWSYLHPKDGLMPMYLNIQAHLYRVLENIHKVLNDRDRWTRAYRAKKNK"
ORIGIN
1 atggctctgg ttcaggaccc gggggccggt ggtcttcacg cagagacggc acatccagga
61 cctcaaccgc cgcgtcgtcg cccacgccag cagtctccgg gctcgtcatc aaccgctgcc
121 gaatcctcac gaaaacgtgc ctctgcctcc gctgcccccc ggcgcagagc cgcctctacc
181 ccccggcgct cgccctcgac gagtgagata aaacctcctc ggggcacggt ggtggccccg
241 cgcggacacg gactcctcta cgccgtggac gcttcatcca acacccccct ggaaatcaag
301 taccatctgc acctggctca cgctcttacc ggtcttctga aagtgaactt gcaaacgctt
361 cccgccgacc tcagcgcgac ttccctcgac tccctggaca gcgggcagct gcgtcccctc
421 ctgcagcgcc tgcacccctc cgtggcggag atctggactt gcggcacccg gggcgtcgtc
481 gtccccaccg tcgtccaccc agagaaggag gacgcagacg cagactccca ccgccaaggc
541 gaaggggatg tcgccccacc agccccccgt ctcaacttcc ccctccggtt tctggtgcgc
601 gggcgaaaag cgcatctcgt tcaggagata cagagcgtgc agcgctgcga ctactgcggt
661 cgcttttaca aacatcagca cgaatgctct gtgcgccggc gggacttcta cttccaccac
721 attaacaccc attcctccag ctggtggcag gagatcagct tctttccgat cggctcccac
781 gcgcgcaccc agcggctctt tgtcacctac gacgtagaaa cctacacatg gatgggctcg
841 ttcgggaaac agttggtacc ctttatgctg gtcatgcacg tctctggcga ggagaccctc
901 gttcgccaag cctgcgagct ggccctagag ctccgatggg acgtgtggaa caaccgcccc
961 aacacctttt acgtagtgac accggagaaa atggccgtgg ggaaaaagtt ccgcgagttc
1021 cgcgaccgct tgcaaactct cctggccttg gatctatgga gctccttcct tgcggctaat
1081 cctcaactct ccgactgggc ccgggctgag ctgggtctct cctcgccgga ctgtctcacc
1141 tacgaggagt tgaaaaaagc gccggccctc aagggacagc cgcgcttcat cgaactttac
1201 atcgtgggtc acaacatcaa cggcttcgac gagatcgtcc tggcggcgca ggtcatcaac
1261 aaccgctcgg acgtgcccgg gcccttcagg atctctcgca acttcatgcc ccgcgccggg
1321 aaaatactct ttaacgatgt caccttcgcc ctccccaatc ccaggcagaa aaagcgcacc
1381 gacttcacgc tgtgggaaca gggcgcctgc gacgacacgg acttcaaaca tcagtacctg
1441 aaagtgatgg tgcgggacac cttcgccctc acccacacct ctctcagaaa ggccgctcaa
1501 gcgtacgccc tgccggtaga aaaaggctgt tgtccataca aagcggtgaa cgaattttac
1561 atgttaggtt cttaccgagc ggacgaaaaa ggatttcccg ccgaagagta ctggaaagac
1621 cgcgaggaat acctcctcaa ccgcgaactg tgggagaaaa aacaagagac ggcctacaac
1681 ctggtccgcg agacgttgga ctactgcgct ctcgacgtgc tggtgaccgc cgccctggtg
1741 gacaaactcc gggaatccta cgcccagttc atccaagact ccgtgggact acccggggcc
1801 aactttaacg tcttccaacg ccccaccatc tcttccaact cccacgccat cttcagacag
1861 atcctctacc gggccgaaaa accccacaag acccacttgg gagacggcct catggctccc
1921 tcgcgcgaga tgtacgacta cgtgcgagcc agcatccgcg gggggcgctg ttaccccact
1981 tacatcgggg tgttgaggga acccctgtac gtgtatgaca tctgcggcat gtacgcctcg
2041 gccctgaccc accccatgcc ctggggaccg cccctgaatc cctacgaaag ggccctggcg
2101 gtgaagaagt gggaagacgc gttgcaagac acggacaccg aaatcgatta ttttaataag
2161 atcctgctac ccggtatctt caccatcgac gccgaccccc cgcccgccaa cttgctagat
2221 cccctgcctc cgttctgctc cagaaaaggg gggcgattgt gttggaccaa cgagcccctc
2281 cgcggggagg tggctaccag cgtggacctc atcaccctgc acaatcgcgg ctggcgcgtg
2341 cgcatcctgc ccgacgagcg caccgccgtg ttccccgagt ggcggtgcgc ggcccgggag
2401 tacgtgcaac tcaacatcgc cgccaaggag agggccgatc gggagaaaaa tcagaccctg
2461 cgctccatcg ccaagttgct ttccaacgcc ctctacgggt ctttcgccac caaacttgac
2521 aacaaaaaga tcgtgttttc tgatcagatg gacccctcca ccatcaaaag catcgccgcg
2581 gggcacgtga atatcaaatc cacctcgttt gtagaaactg acaacttgag cgccgagatc
2641 atgccggctt ttgagagggc ctactcaccc gaacagctgg ctctggtcca cagcgatgcg
2701 gaagaaagtg acggagaggg tgggcacgcc cccttttata cccctttggg gggtgcagat
2761 cacgtgacct acacttacaa gccaatcacc ttcgtggacg cggaggagga cgacctgtgt
2821 ctgcacaccc tggaaaaggt ggaccccctc attgaaaacg acagataccc ctcgcagatt
2881 gcctccttcg tgttagcctg gaccagagcc ttcgtctcgg agtggtccca gttcctgtac
2941 gcggaagacc tcggaacacc tttggaagat cgccccctca agtctgtcta cggagacacc
3001 gacagccttt ttgtcacgga agcgggccac aaactcatgg aaacgcaagg taagaaacgc
3061 atcaaaaaaa atggaggcaa cttggttttt gatcccgcta aacccgagct cacgtggcta
3121 gtggagtgcg agaccgtctg cgctcagtgc ggagccgacg cctactcgcc cgagtcggtc
3181 ttcctggccc ccaaactcta cgccctccaa tgtctgcact gcaccaaatg tcagcacgtt
3241 tccaagggaa agctgcgcgc caagggacac gcggccgagt ccctcagcta cgacctcatg
3301 cttcgttgct atctggccga ctcacaggga gacgacgtcc gcttcagcac cagcaggatg
3361 agcctgaagc gcaccctcgc aagcgcccag cccggggctc atcccttcac cgtcaccgag
3421 accaccctca cccggacgct gagaccctgg aaggacagaa ccctcgcggc cctggacgcc
3481 caccggctgg tgccctacag cgaaagtcga cccaaccccc gcaaccaaga agtctgctgg
3541 atcgagattc catag
//